Clarias gariepinus (North African catfish): 128511611
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Entry
128511611 CDS
T10780
Symbol
rpn1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00510
N-Glycan biosynthesis
cgar00513
Various types of N-glycan biosynthesis
cgar01100
Metabolic pathways
cgar04141
Protein processing in endoplasmic reticulum
Module
cgar_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
128511611 (rpn1)
00513 Various types of N-glycan biosynthesis
128511611 (rpn1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128511611 (rpn1)
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Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
DUF2203
Motif
Other DBs
NCBI-GeneID:
128511611
NCBI-ProteinID:
XP_053340521
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Position
23:21029903..21037315
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AA seq
600 aa
AA seq
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MALRSCRWFVCFCGLFLLSSGVRGDGLVNEEVKRTLDLSTHLAKISAEILLANHGGSAVQ
SFTLALEPELAAHLAYIGASVKGEEEDDEALELKETSIKGQSGTFFQAHLPSALGAGAKL
RVKVETVFSHVLTPFPTRITQAERQLVVFQGNHYLFSPYPTRSQTTRVRLASKTVESYTK
LGNPSKNEEVIEYGPFKDVPPFSQDTMKIHYENNSPFLTISSITRTIEVSHWGNIAVEET
IDLRHTGAYLKGPFSRYDYQRQSDSGISSIRSFKTILPASAQDVYYRDEIGNISTSHLQV
LEDSVEVEVRPRFPLFGGWKTHYIIGYNLPSYEYLYTLGDQYALKMRLVDHVYDDQVIDQ
LTVKLILPEGARNINLETPYSIKRSPDQLHYTYLDTFGRPVLVATKENLVEQHIQDMVVH
YNFNKILMLQEPLLVVGAFYILFFTVIVYVRLDFSITKDPAAEVRMKVASITEQVLTLVN
KRLGLYRHMDDVVNRYKQSRDTGALNAGRKNLEAEHRGLTNDVTGLQARLKAEGSDLADK
VSEIQKLDGQVKDLVMQACQESERLVTGKVKKEAYIASEKSLTSKRQELISRIDGLLDAL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcgttcgtgccgctggtttgtgtgtttctgtgggttgtttttgctatcgagt
ggagttcggggtgacggtttggttaacgaggaggtgaagcggacgctggatctcagcaca
cacctggcaaaaatatccgccgaaatcctgctggccaaccacggaggctctgcagtgcag
agcttcactctcgccctggagcctgagctcgccgcacaccttgcctacatcggcgcgtct
gtaaaaggtgaagaggaggacgatgaagctttagaattaaaggagacatccatcaaagga
cagagtgggacgttcttccaggcacaccttccctcagccctgggagctggtgcaaagctg
cgtgtgaaggttgagaccgtgtttagccatgtccttacgccttttcccactcgcatcact
caagctgaacggcagctggtggtgttccagggcaatcactacctgttctcgccctacccc
acccgtagccagaccactcgcgtgcgccttgcctccaaaactgttgagagctacaccaag
ctgggcaacccgagcaagaacgaagaggtgattgagtacggccctttcaaggatgtccct
cctttcagtcaggacaccatgaagattcactatgagaataactcaccgttcctgaccatc
agcagcatcacacgcaccatcgaggtttcccactggggcaacattgctgtggaggaaacc
atcgaccttagacacacgggggcttaccttaaggggccgttctctcgctacgactatcag
aggcagtctgacagtggcatctcttccatcagatccttcaagacaatcctccctgcttct
gctcaagatgtctactaccgtgacgagatcgggaacatctccacatctcacttgcaggtc
ctggaagattccgttgaagtcgaagtccgcccccgctttcccctgttcggcgggtggaag
acacactacatcatcggatacaatctgcccagctacgagtatctctacacactgggtgat
cagtatgctttgaaaatgcggctagttgatcacgtgtatgatgatcaggttattgaccaa
cttactgtcaaactgattctccccgagggggcaaggaacataaatttggagactccgtac
tccatcaaacgaagccctgatcagcttcactacacctacctggacacttttggcaggcct
gttctggtggcaactaaggagaatctggtggagcagcacattcaggacatggtggttcac
tacaacttcaataagatcctgatgctgcaggagccgttactggtggtcggtgcattctac
atcttattcttcacggtcatcgtttatgttcgtctggatttctccatcactaaggaccct
gcagcagaggtgcgaatgaaggtggcctccatcacagagcaggtcctgactctggtcaat
aagaggctcgggctgtacagacacatggacgacgtggtgaaccgctacaagcagtcacgt
gacaccggcgcccttaacgcggggcgtaagaacttggaggctgagcatcgtggcctcact
aacgacgtcacaggcctgcaggctcgccttaaagctgaaggatctgaccttgctgataag
gtttcggagatccagaagctggacggccaagtgaaagacttggtaatgcaggcctgtcag
gagtctgagcgtctcgtaaccgggaaggtgaagaaggaggcgtatattgcttcagagaaa
tctcttaccagcaagagacaggagctgatctcacgcatcgacggcctcctcgacgcactc
taa
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