Clarias gariepinus (North African catfish): 128511613
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Entry
128511613 CDS
T10780
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128511613 (smarcd1)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128511613 (smarcd1)
PBAF complex
128511613 (smarcd1)
GBAF(ncBAF) complex
128511613 (smarcd1)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128511613
NCBI-ProteinID:
XP_053340523
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Position
23:complement(11765039..11780130)
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AA seq
521 aa
AA seq
DB search
MAARGGFQQAASGGGGGGGGGGMGPGPPVPGGGGGGPGMAPGTPAGRMGPAGPQNPMYRS
PMPGPGYPRPGMPPANRMTPQGPPMGPPGYGASPVPRPVMPVMDPSRKRPAPPQIPQQVQ
QQQNRNQHTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKR
PIKQKRKLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFS
SFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQ
FKLDPRLARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKF
SEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQ
QEIAGLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPE
EERRAEFYYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgtggaggttttcagcaagcggcgtctggaggcggaggaggcggtggaggt
ggcgggatgggaccaggacctccggtaccgggcggaggaggaggaggaccgggcatggct
cctggaacgcctgctggaaggatgggacccgcggggccgcagaatccgatgtatcgttct
ccgatgcctgggcctggatacccgagacctgggatgcccccagcaaaccggatgactccc
caaggcccacccatgggtcctccaggctacggcgctagtccagtacctcgccctgtaatg
ccagtcatggacccgtctcgcaagaggcctgcgccccctcaaataccacagcaggtccaa
caacaacagaatcgcaaccaacataccaagaagaagaagatggctgataaaattctacct
cagagaatcagagagctggtaccagagtctcaggcctacatggatctgctggcttttgag
aggaagctggatcaaaccataatgcgcaagagactcgacatccaggaggcactaaagaga
cccatcaagcaaaaacgaaagctgcggatttttatctccaacactttcaaccctgccaag
cctgatgccgaggacggtgagggaactgtagcatcatgggagctgcgagtggaaggccga
ctgcttgaggacactgctgtatctaaatacgaagccaccaagcagaagcggaaattttcc
tctttcttcaagtctctggtgattgaattggacaaagacctttatgggcctgacaatcat
ttggtagagtggcacagaacacccactactcaggagactgatggctttcaggtgaaaaga
cccggagacgttggagtgcgctgtactgtcctcctcatgcttgactaccagcctcctcag
tttaagctggaccccagactggcacgcatgctgggcatccatacccaaaccagacccgtc
atcatccaggctctgtggcagtatgtgaagacacacaaactgcaggaccctcatgagcgc
gagtttattaactgtgacaaatacctccagcagatctttgagacccagaggatgaagttc
tctgagattcctcagcggctgcacgctctgctaatgcctcctgaaccgatcatcattaac
catgtcataagcgtggacccgaatgaccagaaaaagacagcctgctacgatattgacgtt
gaggtggatgatactcttaagacccagatgaattcttttctgctgtccactgccagtcag
caggagattgcaggcttggataacaagattcatgagaccatcgagaccatcaatcagctg
aagactcagcgggagttcatgctgagttttgcccgtgatccccagggctttatcaacgac
tggctgcaatcccagtgcagggacctcaagaccatgaccgacgttgtaggaaatccagaa
gaagagagaagagccgagttctattaccagccttgggctcaggaggccgtgtgtcgctac
ttctactctaaggtccagcaaaggaggcaggagttggagcaagcactgggcatcaggaac
acataa
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