Clarias gariepinus (North African catfish): 128511648
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Entry
128511648 CDS
T10780
Symbol
mkrn2
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-2
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128511648 (mkrn2)
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128511648 (mkrn2)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128511648 (mkrn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf-CCCH_4
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH_3
zf-CCCH_9
zf-RING_2
zf-C3HC4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
128511648
NCBI-ProteinID:
XP_053340570
LinkDB
All DBs
Position
23:complement(13202722..13210779)
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AA seq
420 aa
AA seq
DB search
MSTKQVTCRYFLHGVCREGSRCMFSHDLATSKPSTICKFYQKGVCAYGERCRYDHIKPGG
RGGGPPVDHTNRAGNAGASVLPSTGPGPPPPPSTTRITKKPLVLRDRALGGDSRGQPYSG
ESAELLDCWDYRDVSQVKPHSYLDAIRSGLESSAAASVPAFPDISHQALLCPYAAAGQCH
YGDTCPYLHGDMCEICRLQVLHPHDPVQRAAHEKVCMTAFEKDMEQAFAVQHSQEKVCSI
CMEVVYEKASPSERRFGILSSCCHTYCLGCIRQWRCAKQFDNKIIKSCPECRVVSEFVIP
SMYWVEDQEEKNRLIEEFKCGVSKKPCKYFDQGRGTCPFGGKCFYMHAYPDGTRAEPDKP
RKQLSSEGNVRFLNSVRLWDFIEEREHRGVPQYEDDVNDLGELFMQLSGAGEESGTAASH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaaagcaagtcacgtgcagatatttccttcatggcgtttgtcgagaggggagc
aggtgcatgttttcacatgatctggcaaccagcaagccttcaacaatatgtaaattttat
cagaaaggtgtatgtgcttatggagaacgatgcagatatgaccacatcaagccgggtggc
cgtggaggtggaccccctgtggatcacacaaacagagccggtaatgcaggagcatctgtt
ctgccctccactggacctggacctccacctccaccaagcactacgagaatcactaagaaa
ccactcgtgctgagagacagagctttgggaggtgacagtcgagggcagccgtacagcgga
gaaagtgcagagcttttggattgctgggattacagagacgtctctcaggtcaaacctcat
agctacctggatgccatccgctcagggctggagagttcagccgcagccagcgtaccagcg
ttcccagatatttcccatcaggccctgctttgcccttacgcagccgctggtcagtgtcac
tatggcgacacatgcccgtatctccatggcgacatgtgtgaaatttgcaggttgcaagtt
ttgcacccgcatgacccagtgcagagagcagcacatgagaaggtgtgtatgactgcgttt
gagaaggacatggagcaggcattcgcggtgcagcacagtcaggagaaagtgtgcagtatc
tgcatggaggtagtgtacgagaaggcgtctccgtccgagcggcgcttcgggatcctgtcc
agctgctgccacacctactgcctcggctgcatccgccagtggcgctgcgccaagcagttc
gacaacaagatcattaagtcttgtccagaatgccgggtggtgtccgagtttgttattccc
agcatgtactgggtggaagatcaggaggaaaagaatcgtctcattgaggagttcaaatgt
ggagtcagtaaaaaaccctgcaagtattttgaccagggaagaggaacatgtccgttcgga
gggaaatgtttctacatgcatgcctaccctgatggaacgcgggctgaaccggacaaaccc
cggaagcagctcagctcagaaggaaacgttcggttcttgaactctgtccgactgtgggac
ttcatcgaggaacgagagcaccgcggggttccccagtacgaagacgacgtcaacgacctg
ggcgaactcttcatgcagctctccggtgctggggaagaaagcggaactgcagcatcacac
tga
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