KEGG   Clarias gariepinus (North African catfish): 128511678
Entry
128511678         CDS       T10780                                 
Symbol
rbbp5
Name
(RefSeq) retinoblastoma-binding protein 5 isoform X1
  KO
K14961  COMPASS component SWD1
Organism
cgar  Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cgar03036]
    128511678 (rbbp5)
Chromosome and associated proteins [BR:cgar03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     128511678 (rbbp5)
    COMPASS/SET1 complex (yeast)
     128511678 (rbbp5)
    MLL-HCF complex
     128511678 (rbbp5)
    MLL3/MLL4 complex
     128511678 (rbbp5)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40 WD40_CDC20-Fz Beta-prop_EML WDR55 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 EIF3I Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_WDR75_2nd Beta-prop_LRRK2 WDR54 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_WDR11_1st Beta-prop_TEP1_C Beta-prop_Vps41 BUD22 Frtz
Other DBs
NCBI-GeneID: 128511678
NCBI-ProteinID: XP_053340610
LinkDB
Position
23:complement(26232240..26239228)
AA seq 540 aa
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLCWSRDGHKLVSASTDNMVSQWDVLTGDCDERFTFPSPILKLQYHPRDA
DKVLVCPMKSAPVLLTLLDSKHVVLPVDDDSDLNVVASFDRKGDYIYTGNAKGKILVLET
STQELVASFRVTTGTSNSTAIKSIEFARKGSCFLINTADRIIRVYDGLEILTCGRDGEPE
PMQKLQDLVNRTPWKRCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGANAAEDEEVDVTSVDPIPAFCSSDEELEDYKALLYLPIAPEVEDPEENPFGPPP
DGQGSTPDDGSTHNTSSDKKQRQPSADGAPPKKKARTTTIELQGVPSDEVHPLLGVKGDG
KSKKKAAGRPKGSKGKEKDSAFRPKLFDREKDRGAELDGAGLKGTLIASAYKPHDVQGLD
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgaaccttgagttgctcgagtcattcgggcagaactaccccgaggaagcggacggtacg
cttgactgcatcagcatggctctgacgtgcacgtttaaccgctgggggacgctgctcgct
gtcggctgtaacgacggacgcatcgtcatctgggacttcctcacacgaggcatcgccaag
atcatcagcgcacacatccaccctgtctgctcgctctgttggagtcgagatggacacaag
ctggtcagcgcgtccacagataacatggtgtctcagtgggacgttctgaccggagactgt
gatgaaaggttcaccttcccctcccccatcctcaagctgcagtaccaccccagagatgca
gacaaggtgctggtgtgtccaatgaagtcagcaccagtgctcctcacgcttttagactcc
aaacatgtggtcctgccggtggacgacgactcggacctgaacgtggtggcatcattcgac
aggaagggagactatatttacacaggaaacgccaagggcaagattctggtgttggagacg
agcactcaggaactggtggcgtcgttcagagtgaccacaggcaccagcaactccactgca
atcaagtccatcgagtttgcacgcaagggcagttgtttcctgattaacacagccgatcgt
attatcagagtgtacgatggcctagagattctcacctgcgggagggacggagaaccagaa
cctatgcagaaactacaggaccttgtcaacaggactccatggaagcggtgttgtttctca
ggcgatggtgagtacatcgtggcaggctcggctcgacagcacgcgctctacatctgggag
aaaagcatcgggaacctggtgaagatcctccacggcacacgaggagagctgctgctggat
gtagcgtggcatcctgtgcggccaataattgcctccatctccagcggtgtggtctcaatc
tgggcccaaaaccaagtggagaactggagcgccttcgccccggatttcaaagagctggac
gagaacgtggagtacgaggagagagagtctgagtttgacatcgaggacgaggacaagagt
gaaccagaacagacaggagccaatgctgctgaggatgaggaagtggacgtgacctctgtt
gatccaataccagctttttgtagcagtgatgaggaactggaggactataaggcactgctg
tatttacccatcgctcctgaggtggaagaccctgaggagaacccattcggcccgcctcct
gatggacaaggctccacccctgacgatggctccacccacaacacctcctcagataagaaa
cagagacagccgtctgcagacggagctccgcccaaaaagaaagctcgaactacaaccatt
gaactgcagggcgtccccagtgatgaggtgcacccgttgttgggggtgaagggagacggg
aagtcgaagaagaaggcggcaggccgtccgaagggatcgaaaggtaaagagaaagattca
gcgtttagacccaaactgttcgacagagagaaagacagaggggcggagttggacggggcg
ggactaaagggaacgctcatagcttcagcgtacaagccgcacgatgttcagggtctggac
tga

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