Clarias gariepinus (North African catfish): 128511860
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Entry
128511860 CDS
T10780
Symbol
mybpc1
Name
(RefSeq) myosin-binding protein C, slow-type
KO
K12557
myosin-binding protein C, slow-type
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128511860 (mybpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128511860 (mybpc1)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128511860 (mybpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
THB
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
PHD_4
Motif
Other DBs
NCBI-GeneID:
128511860
NCBI-ProteinID:
XP_053340840
LinkDB
All DBs
Position
2:complement(34943167..34980945)
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AA seq
1320 aa
AA seq
DB search
MPEPTKKDDGQPEENVATGTGEAVLPAEISLEVSPPEAKAMVKDPEHKLTQPEQEPVTTA
AVKPHPVLTEVAEQQPVVGEVSQPQPIVTEPVVHEQERPESARPVKTVQLCVVEEVPYHP
PCPAPPMNDAVKAADTVPIVTVVPPPSPSLKDKDDEVAAGSPSPPPTTEDGSSHKNLSVD
LTNDSAPESSRERKDSVWSLGDGQPPEEIDKQVENPPLSTLLIERPQGGSIQVGGDITFI
AKVEAKDLLRKPTVKWFKGKWMDLASKTGKHLQLKESFDRVTKIHTFEMHIIKAKENYGG
NYRCEVTYKDKFDSCSFDLEVKDVPETQSIDIRSAFKRSSEGQEDAGELDFSGLLKHREH
KQEEVPEVDVWEILKNARPDEYEKIAFMYGITDLRGLLRRLKKTKKEQKKSEAFAKRLEP
AYQVDKGGKVRLVVDLADPTVELKWYKNGQEIRPTPNNRKFIFEHKGTQRIMVINNCQLN
DDAAYSVVAGDEKCTTELFVKVLPVNIVKNLEPVKTTVNERIELECEVSEEGAQVKWMKN
GVEVPTGVRSRYRVKSEGTKHWLIIEDAIKEDTGTYSVMATGGTSEAHVQVDLKPLKILQ
DLQDVTIRLGQPLKLHCEILPGNVPGRWYRNGQLIQSSDRITIIHRAKTHRMEVESCTLH
DAGDYTFVPEGYTQSLSAKVHIIDPPKVYLDALNAPDNTITVVAGNKLRLEVPITGEPQP
RVVWMKGERVILETGNRVRAETFSDHTSLTIEVTEREDSGNYKIVLQNEAGEDTGSVKIK
VVDIPDPPGPPMVPEIGGDWCTMTWEPPLYDGSSPILGYFIERKKKQSSRWMRLNFDLCK
ETTFEPKKMIEGVPYEVRIFAVNAIGVSKPSEPSKPFIPLAVTSEPTLLVVDEVTDTTVS
VKWRPPETIGAAGLDGYQVEYCIEGTDEWVLANKELIEKTKYTITGLTPESKILIRVKAI
NKAGSSQPRTIQHSILVKEVIEHPKIRIPRHLKQTYMRKVGEQVNLVVPFMGKPKPKITW
LKDDQAIDPAQVNIRNSDCDSIIFIRKAERKHSGKYKMTVQVEKLADTAILDIQIVDLPG
PPQCVRIDEVWGENVALDWTPPKDSGNAPITGYTIQKADKKTMEWYTCIEHYHRTCITIT
ELVVGNEYYFRIFSENMVGLSEKATTTKDTAVIVKEGMNLKNPEYINYDFTEAPKFTQPL
INTFAVAGYNASLNCSVRANPRPKVIWMKNKIIILDDPRYRMFSSQGVCTLEIRKPSPFD
GGVYTCKAINDLGEAQVECKLEVKGGFTFIELMKRGVPLHLIDTYVKETKSPELEKKGSD
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcccacaaagaaagatgatggtcagcctgaagagaatgttgccacaggcact
ggggaggctgtgcttccggctgagatttcccttgaggtgtctccaccagaggctaaagcc
atggtcaaagacccagagcataaactgactcaaccagagcaagagccagtaacaactgca
gcagtaaagccacatccagtattgactgaggttgctgagcaacagccagtagtgggagag
gtctcacagccacagccaatagtgacagagcctgtagtgcatgaacaggaaaggccagaa
tccgcacgacccgttaagacggtgcagttatgtgtggtcgaggaggttccctaccaccct
ccatgccctgcaccacccatgaatgatgcagtgaaggctgctgatacagtgccgatagtc
acagtggtcccccctccttccccctccctcaaagataaagatgatgaagttgctgctggc
agtccgtcacctccgcccacgacagaggatggcagttcacacaagaacctttctgttgat
ctaactaatgatagcgcccctgagtcctccagggagagaaaagactcagtttggtccctg
ggagatggacaacctcctgaggagattgacaagcaggtggaaaatccacctctctctacc
ttactaattgagagaccacagggtggctccatccaagtaggtggagacattacctttatt
gcaaaggtagaggccaaggatttgcttcgtaagccaacagtaaaatggttcaaaggtaaa
tggatggatctcgccagcaagacaggaaaacacctacagctgaaggaaagttttgatcga
gtcactaagattcacacttttgagatgcacatcattaaggctaaggagaactatggtggg
aattacagatgtgaggtcacctataaggataagtttgacagctgctcgtttgacctggag
gtcaaagatgttccagagactcagagtattgacattcgctcagccttcaaaagaagcagt
gaaggccaggaggatgcaggagagcttgactttagtgggctccttaaacatagagagcac
aaacaggaggaggtaccagaagtggatgtctgggagatcctgaaaaatgcccgaccagat
gagtatgagaagattgcttttatgtatggcatcacagacctccgtggtctgctgagaagg
ctgaagaagacgaaaaaagagcagaagaagagtgaagcatttgccaagaggttagaacct
gcataccaggtggataaaggagggaaagtacggttagttgtagatctggctgacccaact
gttgaactgaaatggtacaagaatggccaagagattcgtcctactccaaataataggaag
tttatctttgagcacaagggcacacagaggatcatggttatcaataactgtcagctgaat
gatgatgctgcttattcagttgtagccggagatgagaaatgtactaccgaactttttgtt
aaagtgttaccagtgaacattgttaaaaacctcgagcctgtaaagactactgtcaatgaa
cgaatcgagctagagtgtgaggtgtcagaagagggagctcaagttaaatggatgaaaaat
ggggtggaggttcctactggggtgcgttcaagatatcgtgtgaagagtgaaggcacaaag
cactggctaattatagaagatgccataaaggaggacacaggcacttattccgtcatggca
actgggggtaccagtgaggcccatgtccaagtggacttaaaaccattgaagattctgcaa
gatctacaagacgtgactatccgtttggggcagccactcaagctgcactgcgagatcttg
cctggaaacgttcctgggcgctggtacagaaatggccagcttatccagtccagcgatcgc
atcaccataatccacagagccaagactcataggatggaagttgagagctgcaccctacat
gatgctggagattatacttttgtccctgaggggtacacacagagccttagtgcaaaagtt
cacataatagatccccctaaagtgtatttggatgctctgaacgctccagataacactatc
acggttgtggctggtaacaagctgcgtctggaggtccccatcactggagagcctcaacca
agagtggtgtggatgaaaggggaacgggtcatacttgagacaggcaatcgagttcgtgca
gagacgttctctgaccacacctccctcactattgaagttactgagagagaggacagtgga
aattacaagattgtcctgcagaatgaagcaggagaggacacaggaagcgtcaagattaag
gttgtggacatacctgatcctcctggaccccccatggttcctgaaattggtggcgactgg
tgtacaatgacatgggaacctcctctttatgatgggagttctcctatcctgggatacttt
attgaaagaaagaagaagcagagctccaggtggatgcgacttaactttgatctctgcaaa
gagaccacttttgagcctaaaaaaatgattgagggtgtgccatatgaggtgcggattttt
gctgttaatgcgatcggtgtttccaagcccagtgaaccatccaaaccctttattcccctt
gctgtcacaagtgagcccactttgctggtggttgatgaggtgaccgatacaactgtgtcg
gtgaagtggcgtcccccagaaaccatcggtgctgccgggttagacgggtaccaagtggag
tactgcattgaaggaactgatgaatgggtacttgccaataaggaactgattgagaaaacc
aaatacaccatcacaggcctgacaccagagtccaagatcctaatccgagtgaaggctatt
aataaggctggttccagccaaccgcgcaccattcaacactctatcctggtcaaagaggtc
attgagcatcctaagattcgtatcccccgccacttgaagcagacgtacatgcgcaaggtc
ggggaacaagttaacctcgttgtaccatttatgggtaagccaaagccaaagatcacctgg
ttgaaggacgatcaagctatcgatccagctcaggtcaacatccgcaactcagactgtgac
agcatcatcttcattcgcaaagctgagcgaaagcactctgggaaatataagatgactgtt
caggtggaaaaacttgcagatacagccatcttggacatccagattgtggatcttcctggt
cctccacaatgtgttcgaattgatgaggtctggggtgagaatgtagctctggactggacg
ccacccaaggatagcggcaatgctcccataacaggatacaccatccagaaggcagataaa
aagaccatggaatggtatacctgtatagagcactaccaccgcacatgcatcactataaca
gagctggtagtgggcaacgagtactacttcaggattttctcagagaacatggtgggcctg
agtgagaaagccaccaccactaaagatacagcagtcatagtgaaggagggtatgaacctc
aaaaacccagaatacatcaactatgacttcacagaggcacccaagttcacacaaccactt
attaatacgtttgctgtcgctgggtacaatgcatccctgaactgcagtgtccgcgccaac
ccacggcccaaagtgatctggatgaagaataagatcattattcttgatgacccacgctat
cgcatgttcagcagccagggcgtgtgtaccctagagatacggaaacccagtccatttgat
ggaggtgtctacacctgcaaagccatcaatgaccttggggaggcccaggtggaatgcaaa
ctggaggtgaaaggaggctttacattcattgagctgatgaagcgtggtgttcccttgcat
cttattgatacgtacgtgaaagagacaaagtcgccggagttggagaagaagggatctgac
tga
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