Clarias gariepinus (North African catfish): 128511881
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Entry
128511881 CDS
T10780
Name
(RefSeq) glutamate receptor 3-like isoform X1
KO
K05199
glutamate receptor 3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04080
Neuroactive ligand-receptor interaction
cgar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128511881
04082 Neuroactive ligand signaling
128511881
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128511881
Ion channels [BR:
cgar04040
]
Ligand-gated channels
Glutamate (ionotropic)
128511881
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
128511881
NCBI-ProteinID:
XP_053340869
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Position
24:complement(26027510..26066880)
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AA seq
886 aa
AA seq
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MGQRALAFLLLLLWLIKHSRTGFPNQISIGGVFLRSTVQEHSVFRFAVQLYNTNQNVTEK
PFHLHYNVDNLEQSDSFSVTHAFCSQFSRGVYAIFGFYDQRSVNTLLSFSGALHTSFITP
SQPAEADAHFLLQLRPALKGVVLSIITHYKWDKFVYLYDTDRGFSLLQSVIEAAVVNDWR
VTVRSVGNVADVLEYRRIIEEMERRQEKLFIIDCEEKRINAVLEQVVASGKNTRGYHYIL
ANLGFSNGSIEKVFSGGANVTAFHIINPQNPIVQQFLQRWDKLDEREFPQAQDTPLRYTS
ALTHDAVLVISEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMT
GNVQFDSFGRRTNFTIDVYEMKTGGARKIGYWSEFERFVYLTELQAMNESSSVENRTIVV
TTIMEAPYVMYKRNYMQLEGNDRYEGYCVDLASEIAKHVGIKYKLSIVGDGKYGARDPET
KTWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSF
LDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWNSDSGDEAKDPQAPPDPPNDFGIFNS
LWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESA
EDLAKQTEIAYGTLDSGSTKEFFRRSKIAVFEKMWSYMKSAEPSVFVKTTPDGVARVRKS
KGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKSSALRSAVNLAVLKLNEQ
GLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMTVALVEFCY
KSHQETKQLRLLSAAQNFKHSLPAGAPGFTTYREGYNVYGTESIKI
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggggcagcgcgcgctcgccttcctcctgttattactgtggcttatcaaacactcgcgc
acaggattccctaaccagatcagcatcggtggtgtgttcctgcgttccacggttcaggag
cacagtgtgtttcgcttcgcggttcagctctataacaccaaccagaacgtgacggagaaa
cccttccatctgcactacaacgtagacaacctggagcagagcgacagcttctccgtcaca
cacgccttttgttctcagttctcacggggtgtttacgccatattcgggttttatgatcag
cgctcggtgaacacactgttgtcgttttctggtgctctgcacacctccttcatcactcca
tcacagcctgccgaagccgacgcccatttcctgctccagctgagacccgccctgaaaggg
gtggtgcttagcataatcacacactacaaatgggacaagtttgtctacctgtatgacaca
gatagagggttctctctgctgcagtcagtaatagaagctgcagtggtgaatgattggcgg
gtgaccgttcgctctgtggggaatgttgctgatgttttggaatatcggcggattattgag
gaaatggaacgtcgtcaggaaaaactcttcatcatcgattgtgaagagaagcgcatcaac
gccgtgctggagcaggttgtggcctctgggaaaaacactcgaggatatcactatatctta
gctaacctgggtttctctaacggcagtatagagaaggttttttctggcggcgctaatgtc
acggcgtttcacatcatcaacccacagaaccccatcgtacagcagttcctccagcgctgg
gacaaactggacgagagagagtttccccaggcccaggacacaccgctcagatacacctct
gcactgacccatgatgctgtgctggtaatatcagaagcgtttcggtatttgcgccgtcag
cgtgtggacgtttctcgccgtggcagcgccggtgactgtttagcaaatccagctgttccc
tggagtcagggcatcgacatcgagagggcattgaagatggtccaggttcaaggaatgaca
ggaaatgtccagtttgattctttcggacgccgtacgaacttcaccatcgatgtttatgag
atgaaaaccggtggagcgagaaagattggttactggagtgaatttgagaggtttgtgtat
ctgacggagctgcaggcgatgaacgagtcatcctcagtggagaatcgtacaattgtggtc
accaccatcatggaagctccgtatgtgatgtataagaggaattacatgcagctggaggga
aacgatcggtacgagggctactgcgtggatttagcctctgaaatcgccaaacacgtcggc
attaagtacaagctgtccatcgtaggtgacgggaagtacggcgctcgggatcctgagact
aaaacatggaatgggatggtgggagagctggtgtacgggagggcggacatcgccgtggct
cctctaaccatcacgctggtgcgtgaggaggtgatcgacttctccaagcccttcatgagc
ctcgggatctccattatgataaagaaacctcagaagtccaagcctggtgtgttctcgttc
ctcgacccactagcgtacgagatctggatgtgcatcgtgtttgcgtacatcggtgtgagc
gtcgtgttgttcctcgtcagccgcttcagtccctacgagtggaactctgacagcggtgat
gaggccaaggatccacaggccccgcccgacccgcccaacgacttcggaatctttaacagt
ctgtggttttctctcggagccttcatgcagcaagggtgcgatatctcgccaaggtctctg
tcaggtcgtatagtggggggagtgtggtggttcttcaccttgatcatcatctcgtcctac
acggctaacctggcggcgttccttactgtagagaggatggtgtcccccatcgagagtgct
gaagatctcgccaagcagacagagattgcatatggaacgctcgactctggttccaccaaa
gaattctttagacgctctaagatagcagtgtttgagaagatgtggtcatacatgaagtcg
gccgagccctcagtgtttgtgaagacgactccggacggtgtagctcgtgtcaggaagtcg
aaggggaagtttgcgttcctgctcgagtccacgatgaacgagtacatcgagcagcgcaag
ccatgtgacaccatgaaggtcggcggaaacctcgactccaaaggctacggagtcgccacg
cccaagagctcggcattaagaagtgctgtgaacctggcagtgttaaagctgaacgagcag
ggcctgctggacaagctgaaaaacaagtggtggtacgacaagggggagtgtggcagcggg
ggaggggactccaaggataagaccagtgcactgagtctcagtaacgtagccggggtgttt
tacatcctggtcggggggctgggactcgccatgacggtggcgctagttgagttttgctac
aagtctcatcaggagaccaaacagctgcgactgctcagtgctgctcagaactttaagcac
agtcttccagccggcgcgccgggcttcaccacctacagggagggctacaacgtctacggc
accgagagcatcaagatctag
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