Clarias gariepinus (North African catfish): 128511886
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Entry
128511886 CDS
T10780
Symbol
msx2a
Name
(RefSeq) homeobox protein MSH-A
KO
K09341
homeobox protein MSX
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128511886 (msx2a)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
128511886 (msx2a)
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GFIT
Motif
Pfam:
Homeodomain
HTH_NDX
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
128511886
NCBI-ProteinID:
XP_053340888
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All DBs
Position
2:14102338..14105487
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AA seq
234 aa
AA seq
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MRHGMSAELSEDAACSAQRAPSLPFSVDALMARAGTRTPAETPRYGSGRSTLLYGPPVPE
DCIPSSPVKSAASDRDEASWPKSACSPQPRHLGPSTCSLRKHKTNRKPRTPFTTAQLLAL
ERKFRQKQYLSIAERAEFSSSLCLTETQVKIWFQNRRAKAKRLQEAEMEKLKMAAKPSAH
SGLSFTFPLGSQPQGAAALLYGQSGHFPFRRYMLPMPPLGIYSTPLSYSMYHLS
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaggcacggtatgagcgcagagctcagcgaggacgccgcgtgctcggctcagcgcgcc
ccgagcctgccgttcagcgtggacgcgctcatggctcgcgcagggaccaggactcccgcg
gaaacgcctcgctatggcagcgggcgctcgacgctgctctacgggccgcccgtgcccgag
gactgcatcccgtcgtcgcccgtcaagtcggcagcctcggatcgagacgaggcgtcctgg
cccaagtcagcgtgctcacctcagccacgacaccttggaccgagcacatgttctctcaga
aagcacaagacaaatcgtaagcctcgcacaccattcacgacggctcagctcctggcgcta
gagcgcaagttccgtcagaagcagtacctctccatcgcagagcgtgctgagttttccagc
tcgctttgcctgactgaaacacaggtaaaaatctggttccagaacagacgtgccaaagcc
aagcgactccaggaggccgagatggagaagcttaaaatggcggccaagccctctgcgcat
tcggggctctctttcacgtttcctcttggcagtcaaccacagggagcagcagcactcctc
tatggacaatcaggacactttccttttcgcagatacatgctccccatgcctccacttggg
atttactctacacctttgtcctatagtatgtatcatttgtcctga
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