Clarias gariepinus (North African catfish): 128511890
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Entry
128511890 CDS
T10780
Symbol
trim32
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128511890 (trim32)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128511890 (trim32)
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128511890 (trim32)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128511890 (trim32)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_4
Baculo_IE-1
zf-RING_4
Vgb_lyase
Haem_bd
Motif
Other DBs
NCBI-GeneID:
128511890
NCBI-ProteinID:
XP_053340890
LinkDB
All DBs
Position
24
Genome browser
AA seq
671 aa
AA seq
DB search
MAAASCLDPDLVREVLECPICLETYNQDQLRPKLLQCGHSVCRQCLEKLLASTINGVRCP
FCSKVSRMSSISQLADNLTVLKIIDCASSCVSTAGLMCKSCKNRLPRQYCCDCSVVLCDA
CKVEGHQHHGHTVLSIRAAAEQCRKDLGGRLATLRDTMTNIQKKKTAIDSVSKSLRLKYK
AVQQEYARAELQLQEELGRSRRAFAASLAEVEKLNSQILEEQTYLLNIAEVQVVSRCDYL
TMRIKQTDTALLEEAGGNDEEELDVKSNLPILLKLQEPELIKTENPQSLDMAQLTTKPCT
VNTDEEDGQVLAAAAAAAVAVSATTAPVDSYHDVDMTSTVEEAVCASPGSFKSKSVDGGG
PGTGSATTGQLCQFVKKMGCKGNLPGMFNLPVSICVTPQGDVLVADRGNYRIQIFNRKGF
QREIRRNPSSIDNFVLSFLGADLPNLIPLSIAITPQGLIGVTDNYDNSVKVYTTDGHCIA
CHKNQLIKPWGIAAMPSGQFVVSDVEGGKLWCLAVDRNVGVVNYNRLCSAVRPKFVTCDS
SGTVYFTQGLGLNIENRHNEHHLEGGFSIGSVGTDGQLGKQLSHFFSETEDFRCITGMCV
DANGDLLVTDSGRKEILQFPKEGGYNILIQDGLTCPVGVAVTHKGQLLVLDCWDHCVKVY
TYLQRRRSSTC
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcatcatgtctggatccggacctggtgcgagaggtgctggagtgccccatc
tgccttgaaacctacaatcaagaccagctccgtcccaaactgctccagtgtggccactcc
gtgtgccggcagtgcctggagaagctcctggcgagcaccattaacggcgtgcgatgcccg
ttttgcagtaaagtgtcccgcatgagcagcatctcccaactggctgacaatctcacggtg
ctgaagattatcgactgcgccagctcgtgcgtatcgacggccggcctcatgtgcaagtcg
tgcaagaaccggctgccgcgccagtactgctgcgactgctccgttgtgctctgtgatgcc
tgcaaggtcgaaggtcaccagcatcacgggcacaccgtgctgagcatacgcgctgccgcc
gagcagtgccggaaagacctcggtggaaggctggcgactctcagagataccatgaccaat
attcagaagaagaagacggctatcgatagtgtttcgaaatcgctgcgtctgaagtacaaa
gcggtgcagcaggagtatgccagggccgagctgcagcttcaggaagagctcgggcgatcg
cgtcgtgccttcgcagcatccctggctgaggtagagaagctcaattctcagattcttgaa
gagcaaacgtatctcctgaacatcgcagaggtccaggttgtgtctaggtgtgactacttg
accatgaggattaagcaaacagacaccgctcttctagaagaggcgggcgggaacgacgaa
gaagagctggatgtaaaaagcaatcttcccatacttctaaagttgcaagaacccgagctg
atcaaaacggagaatccgcagtcgttagatatggctcagctgacgaccaagccatgtacc
gttaacacggatgaagaagatggtcaggtgttagctgctgctgccgccgccgctgtggcc
gtctccgccaccaccgcccctgtagattcgtatcatgacgtcgatatgacaagcaccgtc
gaggaagcagtttgcgcctcgcctggtagcttcaaatccaaatctgtggacgggggtgga
cctgggactggatcagcaaccacgggtcagttatgtcagtttgtaaagaagatggggtgc
aaaggaaacctcccgggcatgtttaacttgccagtgagcatctgtgtaactcctcagggg
gacgttctggtggcggaccggggcaactatcgaattcagatcttcaaccgcaaaggtttt
cagcgcgagatccggcgcaacccgagcagcattgacaacttcgtcttgagcttcctaggt
gctgaccttcctaatctcatccctttgtccatcgccatcacccctcagggactcatcgga
gtcacggataactatgataactctgtcaaggtttacacaacagacgggcattgcatcgca
tgccacaaaaaccagctgatcaagccatgggggatcgccgccatgccttctggtcagttt
gttgtgtcagatgtcgaaggaggaaagctgtggtgtctggcggtcgatcgaaacgtcggg
gtcgtgaactacaacaggttgtgctcagccgtcaggcctaagtttgtgacttgcgactct
tcagggacggtctatttcacacaaggattaggtttgaacatcgagaacaggcacaacgag
caccacctggaaggagggttctccatcgggtccgtcgggacggacggccagctcgggaaa
cagctcagccacttcttctccgaaaccgaggatttccgctgcatcacaggaatgtgcgtg
gacgccaacggggacctgctggtgacggatagcggaagaaaggaaatcttgcagttcccc
aaagaaggcggttataacattctgattcaggatggactgacatgtcccgtcggagtggcc
gttacacacaaaggacagcttctggtgttagattgctgggaccactgtgtcaaggtgtat
acttatttacagcggcgacgctcgtcgacttgttaa
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