Clarias gariepinus (North African catfish): 128512154
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Entry
128512154 CDS
T10780
Symbol
sox19a
Name
(RefSeq) transcription factor Sox-19a
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128512154 (sox19a)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128512154 (sox19a)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128512154
NCBI-ProteinID:
XP_053341258
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Position
24:complement(866077..868595)
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AA seq
272 aa
AA seq
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MDLYSMLDHELQHTSIMMPPASVSAHVSPPVAALGGQRSPDPGQKVKRPMNAFMVWSRGQ
RRRMALENPKMHNSEISRRLGAEWKRLGDAQKLPFIDEAKRLRALHMKEHPDYKYKPRRR
SKPAGGGRREETPREEGHTHTLSADALLEGYGWGAAAGGYGSAQADALRYTPQLHRYDLP
SFPYTSAHGYLSSVSAYSPVQYGTSGTQQPSQILSMAKLDPVSPSPGGGVTRRYSPSLAR
RLACTSADTQRSYSSHLQQQHYLTGPASLTPI
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggatctctacagcatgttggatcatgagctccagcacacgtccatcatgatgccgccg
gcgagcgtgagcgcgcacgtgagccccccggtggcggccctgggggggcagaggagccct
gaccccggacagaaggtgaagcggcccatgaacgccttcatggtgtggtcccgcggccag
aggcgcaggatggcgctggagaacccgaagatgcacaactccgagatcagcaggcggctc
ggggccgagtggaagcggctcggggacgcgcagaaactcccgttcatcgacgaggccaag
cggctgcgtgcgctgcacatgaaggagcatccggactacaagtacaagccgaggcgcagg
agcaaacctgcgggtggtgggaggagggaggagaccccgagggaggaggggcacacacac
accctgagcgccgacgccctgctggagggatacggctggggcgcggcggcgggaggctac
gggagtgcacaggcggatgcactcaggtacactccgcagctacaccgctacgacctgccg
agcttcccgtacacgagcgcgcacggctacctgagcagcgtcagcgcgtacagcccggtg
cagtacggtaccagcggtactcagcagcccagccagatcttgtccatggccaaactggac
ccggtgtccccgtccccgggcggcggtgtgactcggcggtacagcccgagcttggcgagg
cggttagcctgtacgagcgcagacacgcagcgcagctacagctctcacctgcagcagcag
cattacctcactggccccgcctccctcacacccatctga
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