Clarias gariepinus (North African catfish): 128512191
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Entry
128512191 CDS
T10780
Symbol
si:dkeyp-117b8.4
Name
(RefSeq) zinc finger BED domain-containing protein 4
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128512191 (si:dkeyp-117b8.4)
04121 Ubiquitin system [BR:
cgar04121
]
128512191 (si:dkeyp-117b8.4)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128512191 (si:dkeyp-117b8.4)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128512191 (si:dkeyp-117b8.4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
ZBED1_RNase-like_helical
ZBED1_RNase-like
Motif
Other DBs
NCBI-GeneID:
128512191
NCBI-ProteinID:
XP_053341320
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All DBs
Position
24
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AA seq
889 aa
AA seq
DB search
MEFPGRRRPGSLGTPTLRRRMDRMLPFSERRTSKVWDHYTQLSMHRVECNHCKRQLSFHN
STTSMREHLGRKHSIRDGAVPPPNTAEVPNPSTLRQHVAASTLLNSRFATSNPPADVPTG
SFQPVVPVIVKEEQNEEQAAEAGEAKHTCTTFTHGSVGGVGSSNANSVPSQDVEPTYGFS
PEELNTTLNNSGGANTSGARGCSDKRAGLFTDLILEMVYRDLQPFSVVEERGFRLLLSCL
EPNYPVPSPSLLGNLLCHRYHILKQCLQQHLQTGLAPRCMAICTEHWRSVDGCGVEGIGQ
FYLTVSAHFVDSNWQLARCVLNTRPIEEYKGNTTNSGPIKFANTLKAVLSEFHLPESYVF
CVVHDTPWGMEGRRQGSITLDQDYQQEFPGPSHASMQSLPEGWEPLLCAGEALKICVQEG
LYVETVRQALADARGIVLHFQHDVNAAAALNQKAEAANKGAPRLVLDDPGRWATAIDMCE
RLLELKWVVSSVLEEQKAAPNLADHQWRLLHELVPVLKTVRIAASFLSEDINASISSLMP
CLQGVSRILGQNIAECSCPVVRGIMERIRTGMEKRWRLTDEESLLDSPAVLSSFLDPRFK
EMRFLSPHARSKLHDKVKELLSVQTYTDDREVDQDIDSGLEVRENDTVGEPAVLGLDDQL
PIPTVASLDSPESCPSCGEEGDSIELQQNENFVAVLSPEHISENITDSPSKATGGCKRAA
NTAELSSPLTCDRQLSGRMRISPVPQSMYDILLGEDPTERMPEIQQQLENYIAEPLCKRS
LSPLHWWRNKEHRFPAVARLARRYLSIPATAIPADRAFAPRESPVAHRRAMLGPKNLDQV
LFLHQNCDYVEQLKGNLPGHREIEHNSSLGGNQSRDSLYQTLVSYDNKV
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccaggtcgaaggcggcctggtagtcttggcactccaactctaaggaggaga
atggatcgcatgttacctttctctgaacgtcgcacgtctaaagtatgggaccactacacc
cagcttagcatgcatcgagttgagtgcaaccactgcaagaggcagctgtcttttcacaac
agcaccacctcgatgagagagcacttgggacgcaagcacagtattcgtgacggagctgtc
ccgcctcccaacacagccgaagtcccaaacccttcaacgttacgtcaacacgtggctgcg
tctactttacttaacagcagatttgcaacatctaatccaccagcagatgtaccgactggc
tcgtttcagccagtagtgcccgtcattgtgaaagaggagcagaatgaagaacaagcagct
gaggccggtgaggccaaacatacctgcactacgttcacccatggttctgtaggaggagtc
ggttcttcaaatgctaattccgttccaagccaggatgtagaaccaacgtacggattttct
ccagaagagcttaacaccacactcaacaacagtggtggcgctaataccagtggtgccagg
ggctgcagtgataagcgtgcaggacttttcacagaccttattttagagatggtatacagg
gacctgcaacctttctctgtggtagaagagaggggcttcagactcttgcttagttgtctt
gaacctaattatcctgttccatcaccttctttgcttgggaacctactgtgccatcgctat
cacatactcaagcaatgccttcagcagcatcttcaaaccggccttgctccccgctgtatg
gccatttgtaccgaacactggcgatctgttgatggatgtggggtcgaaggaattggccag
ttctacctcactgtcagcgcccattttgttgactctaattggcaactagcccgctgcgtt
ttaaatactcgtccaatagaagaatacaaaggcaacaccaccaacagcggccccatcaag
tttgcaaacacattaaaagcagttctgtcggaattccaccttcctgagagctatgtgttc
tgtgttgttcatgacactccatggggtatggagggcaggagacaaggaagcatcacactt
gatcaggactatcaacaggaatttcctggacccagtcatgcttccatgcagtcacttcca
gagggctgggaaccacttctttgtgcaggagaggctcttaaaatctgcgtccaggaggga
ctttatgtggagactgtaagacaggcacttgcagatgctcgcgggattgtccttcacttc
caacatgatgttaatgcggctgcagctctaaatcaaaaagcagaggctgccaacaaaggt
gcaccacgactggtcttggatgacccaggccgctgggccacagccattgacatgtgtgaa
agactgctagagcttaaatgggtggttagctcggtgctggaagagcaaaaggcagcacct
aatttggccgaccatcagtggcgtttattacacgaattagtgccagtgctaaaaacggtg
cgcattgcagcatctttcttgagcgaagacatcaatgcttcaatttcttccttgatgcct
tgtctgcaaggtgtgtctcgaatcctggggcaaaacattgctgaatgcagctgccccgtg
gtcaggggaatcatggaaaggatccgcactgggatggagaagcgctggagactgactgac
gaggaatccttgcttgacagtcctgctgtcctgtcgtcattcctggacccaagattcaaa
gagatgcgatttcttagcccacatgctcgcagcaagctgcatgacaaggttaaagagttg
ttatctgttcagacttatacagatgacagagaggtggaccaagatatagacagcggcttg
gaagtaagagagaatgacacagtaggggaacctgccgttttgggattggatgaccagttg
cctattcccacagtggcatcattggattcccctgagtcatgtccctcatgtggggaggag
ggtgacagcattgaacttcagcagaatgagaattttgtagctgtcttatctccagaacac
atcagtgaaaatattacagattcaccatccaaagctacaggtggatgtaaaagagctgcc
aacacagctgaactgtcatcaccgctcacatgtgatcggcagctctctggccgaatgcga
ataagccctgttcctcaaagtatgtatgacattcttcttggagaagatcctactgaacga
atgcccgaaatccaacagcagctagagaattacatagcggagccgttgtgcaaacgtagc
ctctcacctcttcactggtggcgtaacaaagaacaccgctttcccgcagtggctcgactt
gcacgaagatatctttcaatcccggctactgctattcccgctgatcgtgcttttgcaccg
agggaatcaccggtggcccacaggcgagctatgctaggacccaaaaatcttgaccaagta
ttgtttcttcatcagaactgcgattatgtagagcagcttaagggtaatcttccaggacat
cgagagattgaacataacagtagtctgggtggaaaccaaagtagagacagtctgtatcag
actttagtgtcctatgataataaggtttaa
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