Clarias gariepinus (North African catfish): 128512282
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Entry
128512282 CDS
T10780
Symbol
hnrpkl
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K, like
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128512282 (hnrpkl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128512282 (hnrpkl)
Spliceosome [BR:
cgar03041
]
Common components
Common spliceosomal components
hnRNP proteins
128512282 (hnrpkl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
MOEP19
KH_Vigilin
DJ-1_PfpI
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
128512282
NCBI-ProteinID:
XP_053341453
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All DBs
Position
24:4973960..4984207
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AA seq
430 aa
AA seq
DB search
METEIEQQDEDTTFSNTDTNGKRPAEDMDEEQAFKRSRNTDEMVELRVLLQSKNAGAVIG
KGGKNIKALRTDYNASVSVPDSSGPERILSVSADIETIGEILLKIIPTLEEYQHYNGIDF
DCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLVGGKPQRVV
ECIKVILELTSEAPIKGRAQPYDPNFYDETYDYGGFTMMFEERGRRPMGGFPMRGRGGFD
RMPPSRGGRPMPPSRRDYDDMSPRRGPPPPPLGRGGRGGSRARNLPLPPPPPPRGGGDRF
SHHHGGLDDRPSDRRGRPGDRYESMGGGGYDNNSSWEPFQSGGRGSYGDIGGPVITTQVT
IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQN
SVKQYSGRFF
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaaattgaacagcaggacgaagataccacattcagcaacactgacaccaac
ggtaaacgccctgctgaggacatggatgaggaacaagcctttaaacgttctcgtaacaca
gacgagatggtggagctgagagtgctgctgcagagcaaaaatgcaggtgcagtgattgga
aaaggtggcaagaacattaaagcacttcggaccgattacaatgccagtgtatcagtccca
gacagcagtggcccagagcgcatcttgagcgtgagtgcagatatcgagacaatcggcgag
attctcctgaagatcatccctactcttgaggagtaccagcactacaatggtatagacttt
gattgcgagctgcgcctgctgattcatcagagtttagccggaggcattattggtgtcaaa
ggcgccaagattaaggagttaagagagaatacccagacgaccattaaactcttccaagag
tgctgccctcattccacagaccgtgtggttttagtgggaggaaaacctcagcgagtggtg
gagtgcattaaggtcatcctagaactgacgtcagaggctcctatcaaaggccgtgctcag
ccctacgacccgaatttttatgacgagacctacgactacggtggcttcaccatgatgttt
gaggagagagggcgaaggcccatgggagggttcccaatgcgtggacgtggcggttttgac
cggatgccccccagtcgtggcggacgtcccatgcccccctctaggcgcgattatgatgat
atgagtcctcgccgtggacctcctccacctccgttaggaagaggaggccgaggcgggagc
cgggcccgaaatctgcctcttcctccaccacctcctcctagaggaggaggcgaccggttt
tcccatcatcatggcggtctagacgacagaccgagtgacagaagaggaagacctggagat
cgctatgaaagcatgggtggaggtggatatgacaataactcttcttgggaacccttccag
tctggtggacgaggttcctacggcgacatcggcggccccgtcatcacaacacaagtgact
atacccaaagacctggccggctcgatcatcgggaaaggtggtcagcgcattaagcagatc
cgtcacgaatccggagcctccatcaaaatcgacgagcctctggagggttcggaggatcgt
atcatcaccatcacaggaacgcaggaccagattcagaacgctcagtatcttctgcagaac
agtgtgaagcagtactcgggtcggttcttctag
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