Clarias gariepinus (North African catfish): 128512294
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Entry
128512294 CDS
T10780
Symbol
arpc5b
Name
(RefSeq) actin-related protein 2/3 complex subunit 5b
KO
K05754
actin related protein 2/3 complex, subunit 5
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04144
Endocytosis
cgar04517
IgSF CAM signaling
cgar04530
Tight junction
cgar04810
Regulation of actin cytoskeleton
cgar05100
Bacterial invasion of epithelial cells
cgar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128512294 (arpc5b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128512294 (arpc5b)
09144 Cellular community - eukaryotes
04530 Tight junction
128512294 (arpc5b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128512294 (arpc5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128512294 (arpc5b)
05100 Bacterial invasion of epithelial cells
128512294 (arpc5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128512294 (arpc5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128512294 (arpc5b)
Membrane trafficking [BR:
cgar04131
]
Others
Actin-binding proteins
Arp2/3 complex
128512294 (arpc5b)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
128512294 (arpc5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P16-Arc
Utp12
crAss001_48
BicD
Motif
Other DBs
NCBI-GeneID:
128512294
NCBI-ProteinID:
XP_053341482
LinkDB
All DBs
Position
2:complement(41053071..41056265)
Genome browser
AA seq
150 aa
AA seq
DB search
MSKNTVSDRFRKVDVDEYDENKFVDEDDGAENQQGPDEAEVDSLIRQGNLMGALQAVLKN
PPINTKNQNVKDRAEGLVLKVLSAFKTSDIEKGVQSLDKNGVDLLMKYIYKGFERPSENS
SAILLQWHEKALAAGGVGCIVRVLTARKTV
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaacaccgtgtccgaccgcttccgcaaggtggacgtggatgaatacgacgag
aacaagttcgtggacgaggatgatggcgcggagaaccagcagggtccggatgaagcggag
gtggactcgctgatcagacaagggaacctcatgggagcgctgcaggcggtgctgaaaaac
ccaccgatcaatacgaagaaccagaatgtcaaggaccgtgctgaaggactggtgctgaaa
gtgctcagtgccttcaagaccagcgacatcgagaaaggagtgcagtctctggataagaac
ggcgtcgacctgctgatgaagtacatctacaagggcttcgagcggccgtcggaaaacagc
agcgccatcctgctccagtggcacgagaaggctctcgccgcgggaggcgtcggctgcatc
gtccgagttctgaccgcacggaaaaccgtctaa
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