Clarias gariepinus (North African catfish): 128512358
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Entry
128512358 CDS
T10780
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128512358 (zc3h12b)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
128512358 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
KH_N4BP1_1st
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
128512358
NCBI-ProteinID:
XP_053341570
LinkDB
All DBs
Position
24:25083536..25098675
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AA seq
974 aa
AA seq
DB search
MVLELAAPAGAGPLLQRSISHIERVFRVRVSCSAADTHTHARTHARAATGTPRAEPESRS
EPDTGGGVIVIIRDGTEEDRSRAKDYIVSLISPAQRHHERLTLWLQRRLHEPESAEAKEH
APKLMEDEEGEEEGSSSESEGERRRAERGHGVGGGRKAELMMATKPHRQLCRSPCLDRPS
FSQSSTLQEMRAEDSPATPTSSTLAPPSPLVGHTPADRDYQSKMEFALKLGYSGEQVEAV
LSKLGPSALTNDVLAELVRLGNKGEIEAQTQTQSSSGLSPAGLALTPRGSGGKEAVSPEV
SLEEETTDTYDNLRPIVIDGSNVAMSHGNKEVFSCLGIQLAVDWFLERGHKDITVFVPAW
RKEQSRPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLACDSDGIIVS
NDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVPEHK
KQPCPYGKKCTYGHKCKYYHPERAAQPIRSVADELRAFAKLSAVKTMSEGALAKCGISGA
TAKGDCSEVKRVAPKRQSDPSIRSVGCEQEERLCPARKAEANSVPSLVTALSVPTMPPTK
SHAAGALNTRSASSPVPGSLHFTHSSLEHAGSIQYPPILVTNSQGASVAYSEPFPKYDSV
VSDHGYYSMLSDFSTMSLGSMQDSFCSLEQPDPVGGGGYPGRASSICPESGRSHSSDSFS
SYGGEMYSMEGSLDDGMKVSQSAQSQVQSQAQSRLQAFAHGFHHEALTRVQSYGTDEPKP
GPRKQSSAHLVPHAQHPVVGARSSCPGDYPPLPQNMLPSSGPNQPGRSLGMTRMDSISDS
RLYESNPLRQRRPPLCREQHASWDPLPCGNEPYGYGGYGLTGGLMPCCERVMVRSMPEKM
EQIWRSPWDTPPGPHGPMEPQERHPIPEHQYQTYRNLCNIFPAYVVHSVMEKNPHMTDPQ
QLAAVIVTKLRSCH
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggtgttggagctggccgctcccgccggtgcaggcccgctgctgcagcgctccatctcg
cacatcgagcgcgttttccgggtcagggtgagctgcagcgccgccgacacccacacacac
gcacgcacgcacgcgcgcgccgccaccgggacgccgcgcgccgagcccgagtccaggagc
gagccggacaccggcggcggggtgatcgtgatcatccgggatggcacggaggaggaccgc
agcagggcgaaagactacatcgtgtctctgatctctccggctcaaaggcatcatgagcgt
ttgaccctgtggctccagcgtcgtcttcacgagcccgagagcgccgaggccaaagagcat
gcgcccaagctgatggaggacgaggaaggagaggaagaagggagtagctcggagagtgaa
ggagaaagacggagagcagaaagaggacacggagtaggaggaggaaggaaagccgagctg
atgatggcgactaaacctcaccgccagttgtgtcgctctccgtgtttggaccgtccgagt
ttcagtcagagtagcacgctacaggaaatgcgcgctgaagattctccggccactcccact
tcctcaacactggcgccacccagtccattggtgggccacacccctgcagatcgggactac
cagagcaaaatggagttcgcactgaagctgggctactccggcgagcaggtggaggcagtg
ctgagtaaactggggccgagcgcgctcactaacgacgtcctggcggaacttgtgcgtctt
gggaacaaaggagaaatcgaagcgcaaacgcagacgcaatcgtccagcggactttcgcca
gcagggttagcactaaccccacgtggctctggagggaaggaagccgtgagtcctgaggtg
tcgctcgaggaggagacaaccgacacgtacgataatctccgacccatcgttatagacgga
tccaacgtggccatgagccatggaaacaaagaggttttctcatgcctgggcatccagttg
gcagtcgactggtttctcgagcgaggacacaaagacatcacagtgtttgtaccagcgtgg
agaaaagagcagtcccgccccgatgctcctataacagatcaggaaatcctaaggaagctg
gagaaggagaaaatcctcgtctttactccttctcgtcgagtccaggggcgccgcgttgtc
tgttacgacgatcggtttattgttaaattggcgtgcgattcagatggcatcattgtttcg
aacgataactatcgagatctgcaaaatgaaaagccagagtggaaaaagtttatagaggaa
cggcttctcatgtacagtttcgtcaatgacaagtttatgccaccggatgacccactaggc
agacatggtccaagcctggaaaatttcctccgcaagcgacctgtggtcccggagcacaaa
aagcaaccgtgtccttatggtaagaaatgcacctatggccacaagtgcaagtactaccac
ccagagagagcagcgcagcccatacgatctgttgcagatgaactcagagcttttgccaag
ctttctgctgtcaagaccatgagtgaaggtgctcttgcaaaatgtggcatttctggcgct
accgcaaagggggactgttccgaggtaaaaagagtggcaccgaaacgtcagtcggacccg
agcatccgttcagtgggctgcgagcaggaggagcgactctgccccgctcggaaagccgaa
gctaattcggttccatctttagtgacggctcttagcgtcccgactatgccgccgacaaaa
agtcacgcagctggggcactgaacactcggtccgctagtagcccagtcccggggtcactg
cacttcacgcacagctcgctggaacatgccggaagcatccagtaccctccaatcttggtc
actaacagccaaggtgcctccgtggcatacagcgaaccttttcccaaatacgattctgta
gttagtgaccatggctactattcaatgctgagtgatttctcgaccatgagcttgggaagc
atgcaagacagcttctgtagcttagaacagccagatccagtcggaggaggcggatatccc
ggtcgagcttccagcatttgtcctgaatctggtcgcagccactcttcggactctttctcc
tcgtatggtggagagatgtactctatggaaggtagcttggatgatgggatgaaggtttca
caatctgcacaatcccaagtgcagtcccaagcacagtccagattacaggcgtttgctcat
gggtttcaccatgaggctctgacaagagtccaaagttatggcacggatgaacccaaacct
gggccacgtaaacaatcctcggcccaccttgtgcctcatgcgcagcatccggtggttgga
gcgagatccagttgtccgggtgactatcctccgcttccccagaacatgttgccttcgtcc
ggccctaatcagccaggcagatccttgggaatgacacggatggacagcatttcagattcc
cgtctttacgaaagtaaccccctccggcagagacggccgcctctttgtcgagagcaacat
gccagctgggatcctctaccatgtgggaatgagccttatgggtacggaggttatggattg
acaggaggactcatgccttgctgtgagcgagtgatggttcggagtatgccggaaaagatg
gaacagatttggagatcgccgtgggatacgccacctggacctcacggaccgatggaacca
caggagcgacatccgattcctgaacatcagtaccagacttacagaaacctctgcaatatc
ttcccagcatacgtagtccactcggtcatggagaagaatcctcatatgacggatcctcag
cagctagcagcggttattgtaacaaaactacggtcctgtcattga
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