Clarias gariepinus (North African catfish): 128512413
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Entry
128512413 CDS
T10780
Symbol
tmc2a
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 2-A
KO
K21988
transmembrane channel-like protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgar02000
]
128512413 (tmc2a)
03037 Cilium and associated proteins [BR:
cgar03037
]
128512413 (tmc2a)
Transporters [BR:
cgar02000
]
Other transporters
Pores ion channels [TC:
1
]
128512413 (tmc2a)
Cilium and associated proteins [BR:
cgar03037
]
Other cilia and associated proteins
Stereociliary proteins
128512413 (tmc2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
DegS
Motif
Other DBs
NCBI-GeneID:
128512413
NCBI-ProteinID:
XP_053341657
LinkDB
All DBs
Position
24:complement(5067885..5088570)
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AA seq
917 aa
AA seq
DB search
MPKKSDTAKLAEVGIEIDDSIEDDKKGKSKGKNGKAAAGKQGKAAASEDGGDEDEEAEPR
KGRKAANRKKAVPREASEDDSDYDIPPKRCAGNRKRGKPAGGKNKRGKSSKKKSSRYGGL
ETKKNIGKLLLKKIYNXIVKKKNLNRIKGGEEDEEESMSEGERARLMEEVEEKKKLIANI
RSKPWRMKRRLKHLKEAQVFVDKFEGALGKGKGKKLYAFKVMMTKKWIKFQRDFDNFKTA
CIPWERKIKEVESHFGSSVASYFIFLRWMYGMNLVLFSLTFGLIVIPEVLMGLPYGSIPR
KTVPREEQDTAMDYSVLTDFSGYCKYSVLFYGYYNDQRTIGFLKFRLPLSYLLVGIGNFG
YSLMVVIRTMAKNADVGGGDGEDSEFTFAWKMFTSWDYLIGNAETADNKFASITTSFKES
IVDEQENQKDENIHLRRFLRVLANFLITCILGGSGYLIYFVVKRSQEFAGRDDLSWYEKN
EMEIIMSLLGLVGPMLFETIAELEEYHPRIALKWQLGRIFALFLGNLYTFLLALFDEVNE
KLVEEQSIKNASIWFMKEYYANYSASNPNMTGTPPPLDPADVIRGPCWETTVGIEFVKLT
ISDIQVTYLTILIGDFARALIVRFLNYCWCWDLEAGWPSYAEFDISGNVLGLVFNQGMIW
MGAFYAPGLVGINVLRLLTSMYYQCWAVMASNVPHERVFKASKSNNFYMGLLLLILFLSL
LPVVYTIMSLPPSFDCGPFSGKDRMFDVIIETIELDLPSFMGKLFGYAANPGLIIPAVLL
MVLAIYYLNSVSEAYKNANNELKKKMQMARDEEKNRRNNKDSTNQVMKDLEDLLPKSANM
QNSEEQAGQKDKHGGGKPSKVKPGSAANGVNLQKDISLASANPHARGPVNRAPGPRTAGP
LPGNPGPAPGAGHRKGQ
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaaaagtgatacagcaaaattagcagaagtgggtatagagattgatgacagc
attgaggacgacaagaaaggcaaaagtaaaggcaaaaacggtaaagcagctgcaggcaaa
cagggcaaagcagccgccagtgaggacggaggggacgaggacgaagaggccgagcctcgt
aaaggccgcaaggcagcgaacagaaagaaggcagttccgagggaggcgtcggaagatgac
agtgattatgacattcctccgaagagatgcgcagggaaccgaaagagaggcaagccagcg
ggaggaaaaaacaagagaggcaaaagttccaagaagaagagcagtaggtatggtggttta
gaaacaaaaaaaaatattggaaaattattattgaaaaaaatatataactaaattgtaaaa
aaaaaaaacttaaatcggatcaaggggggggaagaggatgaggaggagtccatgtcagag
ggggagagagcccggctaatggaagaggtggaggaaaagaagaagctgatcgctaacatt
aggagcaagccatggcggatgaagaggagactcaaacacctcaaggaagctcaggtgttt
gtcgataagtttgaaggtgccttgggcaaagggaagggcaagaaactatatgctttcaaa
gtcatgatgacgaagaaatggatcaagtttcagagagattttgacaatttcaagacagcc
tgcataccctgggaacgcaaaattaaagaggttgaaagtcactttggttcatcagttgcc
tcgtacttcatcttcctccgctggatgtatggcatgaacctcgttctcttcagtttgacc
ttcggcctgattgtgatccctgaggttctcatgggcctcccgtatggttctattcctcga
aaaacagtgccacgagaggaacaggacactgcaatggactattcagttctcacagacttt
agtggttactgcaagtactctgtgttattctatgggtactataatgaccagagaaccatt
ggcttcctgaagttccgcctccctctgtcctaccttttggtgggcattgggaacttcggg
tatagtctgatggttgtgatccgaacgatggctaaaaacgcagatgtggggggtggggac
ggcgaggacagcgagttcaccttcgcctggaagatgttcacaagctgggactacctcatc
ggaaacgcagagacggctgacaacaagtttgcctccataaccacgagctttaaggagtcc
atcgtggatgaacaagagaaccagaaggatgagaacatccaccttaggcgattcctgcgt
gtattggctaacttcctcattacctgcatcctggggggcagtgggtacctcatttacttt
gtggtcaaacgctcacaagagtttgctgggagggatgacctgagctggtatgagaaaaat
gagatggagattataatgtcgctactcggactggtgggcccaatgctgtttgagactatc
gccgagctggaggaataccacccccgtattgccctcaagtggcaacttggacgcatcttt
gcccttttccttggtaacctgtacaccttcctgttggctctgttcgatgaggtcaatgaa
aagctggtggaggaacagtccataaagaacgccagcatatggttcatgaaggaatattat
gccaactacagtgcaagtaacccgaacatgacgggcacgccgccccctctcgaccctgct
gatgtgatccgtggcccgtgctgggagacaacagtggggatagaatttgtaaaactgacc
atctcagatatccaagtgacgtatctgaccatcctcattggggactttgcgagagctctg
attgtgcgctttcttaactattgctggtgctgggacctggaggcaggctggccctcatat
gccgagtttgacatcagcggcaatgtcctcggattggtcttcaatcaagggatgatttgg
atgggagcattctatgctccgggtctagtcggcatcaacgtcctccgtcttctgacctcg
atgtactaccagtgctgggccgtcatggcttccaatgtgcctcatgagcgagtcttcaag
gcttcgaaatccaacaacttctacatgggtctccttcttctcatcctcttcctcagcctg
ctgcctgtcgtctacaccatcatgtccctgccgccgtcctttgactgtgggccctttagt
ggcaaagaccggatgtttgacgtgatcattgagacgatagaactggatctgccttcgttt
atggggaagctgttcggttacgcggccaaccccggactcatcatcccagctgtgttgctc
atggttctggcaatttattatctcaactcggtgtctgaggcctataagaacgccaacaat
gaacttaagaagaaaatgcaaatggcaagagatgaggaaaagaacaggaggaataacaaa
gacagcaccaatcaagtcatgaaggatttagaggatttactacccaaaagcgcgaatatg
cagaattcagaagaacaagcaggtcaaaaagacaaacatggtggaggaaaaccatcaaaa
gtgaagccaggatcagctgcgaatggtgtgaacctgcagaaagacatatcgctggcatca
gcaaatccacacgctcgaggtcctgtgaaccgagcaccaggacccaggacagctgggcct
ctgcctgggaaccccgggccagctccaggggcaggacatcgcaagggacaatag
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