Clarias gariepinus (North African catfish): 128512424
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Entry
128512424 CDS
T10780
Symbol
sptbn4a
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04517
IgSF CAM signaling
cgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128512424 (sptbn4a)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128512424 (sptbn4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128512424 (sptbn4a)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128512424 (sptbn4a)
Intermediate filaments
Intermediate filament-binding proteins
128512424 (sptbn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
Motif
Other DBs
NCBI-GeneID:
128512424
NCBI-ProteinID:
XP_053341669
LinkDB
All DBs
Position
24:complement(23771336..23796515)
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AA seq
1434 aa
AA seq
DB search
MLMPREGGRDEAHKLHRKWMKHQAFMAELARNKEWLSKIEQEGKELIEEQPELGPVVQQK
LKEMRECWTHLESTTKAKARQLFETQNHRTTDVPLHSLSDLDQHLSLLQDEPPHSSHSSH
TAYSTHTSPSASVAIQSPRTTFSQQLQRIQSMETQMQLYPGLMQLKSDISGQSDVDGSNV
LRRGPMGIEVQGSGAVAETRIVRLIEPLKERRRILLASKEMHQVTQDLEDEIVWIQERLP
LASSTEYGTNMQSVQQLVKNHEALQMEMQSRKGRVEEVLERAEAVAALRTPEVEIVREGA
MHVRQLWEVLQMETERRTVMLDAVSHAQQYYTEAAKAESWLSGQKLHVLNEEDGNDEAST
LRLLKEQLALEQKVENYAETVGFLSQQCRRLLELGHPDSEQITKQQAHIDRLYVSLKDLV
EQKKTKLEQQYWLYQLKKEVESLEKWISEREAVASSTELGQDLEHVTVLQERFTEFRAET
STAGQRQMDSVNKMVNEMIDCGHSDAATIAEWKDGLNESWADLQELMETRAQMLAASHQL
QKFFTNCQEVLVQIEGKMRQLPEVRSCQVSTANPGTLQRLLHSFEHSLQLLVSQVRQLQE
NASQLRAIYAGEKADTILVREQEVMRAWKELLVACEGSRVQVTTVTDKIQFFAMVRELSM
WTDGIMGQIGPVEDARDMSSLECMISQHQNLKSKMESKSKNFMHCVEMGKMLLAAHNPAA
EEVKEKLEYVMAKQKDLNDKWEQHWEKLQRMQKRIQSAQKSKAEGTWHTTKESLSSGGEA
EGGADEVEQLIRRHEAFRKAATTWKEHFSSLRQVEKLKEEQSKQSTASSLLNRQMFPLSC
LVPSSSSSSSSSSLFRSPLQDMLLESKSGSDLTHTPHAFAQRLGSALNPYAPVMNGSPYH
RLNQQVGMLGTNSSSQTGLNQQGVFGVDSSSYTGINQLGMLGSDSSSYTGLNQQGVTGAN
GLNPLSAMGMTEPKTAFAWQQLKADMQPRINHMHKAVGPLLEAHAGHLVPMGVPVGTEAS
LELLHGRLQRDPRGSRSDPQMDHLRREREYRLGRHTSSEQEIQARLNELPMIVRQERHQR
RRLERQSSSEHEGSGRQRIQKQDSSDQESGKEGSDKKQTGEKRSTMAEIVEQVQEREACH
ARGEVYRPPSSLSAPVSRLDRPRARDRPKPRRRPRPKEPEETRRSRSAPAQSTPSTPQPP
THTVHEEGFLYRKHEEEGKEKSPNSKSWVNLYCVLNKGEIGFYKDARNTTTPYNDEPLLN
LAMCTFDTTNGYKKKKNVFILRSETDGDYIFLAKDEEDLKRWVNSINASLSEIEEIAKWE
KPTTSSTDPDKSERKERSEGAEPSEKSERSDRSDKREGEKSSESSEKRDTLERKRMERRG
RERGEEERGARDRGERGERGEKGERGERGDRERERERDRGDRSSRGSSTSGKSK
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgctcatgcctcgtgagggtgggcgagatgaggctcacaagctgcacagaaaatggatg
aaacaccaggccttcatggccgaactggctcgcaacaaagaatggctgtccaaaatcgaa
caggaggggaaggagttgatagaggagcagccagagcttgggcctgtggtgcaacagaag
ctgaaggagatgagggaatgctggacacatctggagagcaccaccaaggccaaagctcgt
cagctcttcgagacacagaaccacagaaccacagacgtcccattacacagcctctcagat
ctggaccagcacctcagtttgctccaggacgagccacctcattcatcacactcctcacac
acagcatactccacacacaccagcccctcggcaagcgttgccatccagagccctcgtacc
acatttagccagcagctgcaaaggatacagtcaatggagacccagatgcagctctatcct
ggtttgatgcagctgaaatccgacattagtggacagagtgatgtggatggatccaacgta
ctgcgtcgcgggccaatgggtattgaggttcagggctcgggggccgtggctgagacacga
attgtgcgcctgatcgagccactgaaagaaaggaggcggattcttctggcctccaaagaa
atgcaccaagtcacacaggatctggaagatgagattgtgtggattcaggagcgattacca
ttggcctcctctacagaatacggcaccaatatgcagagcgtacagcagctggttaaaaac
cacgaggccttgcagatggagatgcagtccagaaagggtcgtgtcgaggaggtgctggag
agagctgaggcagtcgccgcccttcgcactcctgaggtggagattgtcagagagggagcg
atgcacgtgaggcagctttgggaggtgctacagatggagacagagcgtcgtacggtgatg
ctggatgcagtaagtcatgcccagcaatactacactgaggcagcaaaggcagagtcctgg
ctcagcgggcaaaagcttcatgttctcaatgaggaggatggcaatgatgaagcaagcaca
ctaaggctgctaaaggagcagttggccttagagcagaaggtggagaattacgcagagacc
gtgggtttcctgtctcagcagtgccgccgactgttggagctgggacatcctgatagcgag
cagattactaagcagcaggcgcacatcgaccggctctacgtctccctgaaggacctggtg
gagcagaagaagaccaagctggagcagcagtactggctctaccagctgaaaaaggaggtg
gagtctctggagaagtggatctcagagagagaggctgtcgccagctccactgagcttggc
caggacctggaacatgttacagtgttgcaggagaggttcactgaatttcgggcagaaaca
agcaccgcaggacagaggcagatggactcggtgaacaagatggtgaacgagatgatcgac
tgcggccactcagacgccgccactatcgccgagtggaaggatggcctgaacgagtcctgg
gccgacctgcaggagctgatggagaccagagcacagatgctcgccgcctcacatcaactc
caaaagttcttcactaactgccaggaggtgctggtgcaaattgagggaaagatgaggcag
ttaccggaggtacgttcatgccaggtgagcaccgccaaccccggcacactacagagactg
ctgcactcctttgaacactctctgcagctgcttgtctcgcaggtgcgtcagttgcaagag
aacgcatctcagctccgtgcgatctatgctggcgagaaggccgacacgatcctggtccgt
gaacaagaagtgatgcgcgcatggaaggaactcctcgtggcgtgtgagggcagccgtgta
caggttactacggtgacggacaaaatccaattcttcgccatggttcgtgagctgagcatg
tggacagatgggatcatgggacaaatcggtccagttgaggacgcacgcgacatgtcttcc
ctggagtgcatgatttcccagcaccaaaacctgaaaagtaaaatggagagcaaaagcaag
aacttcatgcactgtgtggagatgggcaagatgcttctcgcagcacacaatcctgcagct
gaggaggtgaaggagaagttggagtatgtgatggcaaagcagaaagatctgaacgataag
tgggagcagcactgggagaaactccagcgcatgcagaaacggatacagtctgcacaaaaa
agcaaggctgaagggacgtggcacacgacaaaggagtcacttagcagtggtggtgaggca
gagggcggggctgacgaggtggagcagctgattcgcaggcacgaggcgttccgtaaggcg
gcaacaacttggaaagagcacttcagctccttacgacaggttgagaaactgaaagaagag
caaagcaagcagtccaccgcctcatctctcctcaacagacagatgtttcctctttcctgc
ctcgtgccgagctcttcctcatcctcatcttcctcgtctctttttaggagccctctgcag
gacatgctcctggaatccaaatctggttcagaccttacacataccccacatgcttttgca
cagaggctaggatctgcactgaatccctatgctcccgtcatgaacggctccccctaccac
aggcttaaccaacaagtcgggatgttgggcacaaacagctccagtcaaactgggttaaac
caacagggtgtttttggggtggacagctcgagttacactggcataaaccaactcggcatg
ttgggttcagacagctccagctacactggactgaatcaacaaggtgtcacaggagccaat
ggcctgaacccccttagtgccatggggatgaccgagcccaaaaccgcatttgcctggcag
cagctcaaagctgacatgcagcccagaatcaaccacatgcacaaggctgtaggtcctttg
ttagaggcccatgctgggcacttggtcccgatgggtgtaccagtgggcactgaggcatcc
ctggagctgctccacggacggctgcagagggaccctcgtggcagccggtcagacccgcaa
atggaccatctgcgcagggagagggagtaccggctcgggcgtcacacctccagtgagcag
gagatccaggcacgtttaaatgagctaccaatgattgtgcgccaggagaggcaccagcgg
cgcaggctagagcgccagtcgtccagcgagcatgaaggcagtggtaggcagagaattcag
aaacaggactccagtgaccaggagtcaggaaaagaagggtcagacaagaagcagacaggg
gaaaaacgctccactatggctgagatagtggaacaggtgcaggagagagaagcatgccat
gcgaggggagaggtgtatcgtcctcccagcagtctctctgcccctgtctctcgtcttgac
cggcctcgagctcgcgatcgcccaaaaccacgacgacggccgcgtcctaaagaacccgag
gagacgcgtcggtcacggtcagcaccggctcagagcacgccaagcacaccgcagccacct
acacataccgttcacgaggagggcttcctgtaccgcaaacacgaagaggaaggcaaggaa
aagagccccaacagcaagtcgtgggtgaacctgtactgtgtgctcaacaaaggcgagatc
ggcttctacaaggacgccaggaacacgacgaccccatacaacgacgagccgctcctcaac
ctggccatgtgtaccttcgacaccactaacggctacaagaagaagaaaaacgtcttcatc
ctaaggagtgaaaccgatggggattacatcttcctggccaaagatgaggaggacttgaag
cgttgggtgaacagcataaacgccagcctgagcgagatcgaggagatcgccaagtgggaa
aaacccaccacttcgtcgaccgaccccgacaaatccgaacgcaaggagcgctccgaaggg
gcggagccatctgagaagtcggagcgatctgatcgatcggacaagcgagagggggagaaa
agctccgaaagttcggaaaagagggacacattggaaagaaagaggatggaacgacgagga
agggagcgaggagaggaagagagaggagcgcgagataggggagaaagaggagagcgtggg
gagaaaggagagagaggagaaagaggagacagagagagggagagagagcgggatagggga
gaccggagttccaggggttccagcacctcggggaagagtaaatga
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