Clarias gariepinus (North African catfish): 128512530
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Entry
128512530 CDS
T10780
Symbol
acsl4b
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4b
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00061
Fatty acid biosynthesis
cgar00071
Fatty acid degradation
cgar01100
Metabolic pathways
cgar01212
Fatty acid metabolism
cgar03320
PPAR signaling pathway
cgar04146
Peroxisome
cgar04216
Ferroptosis
cgar04920
Adipocytokine signaling pathway
Module
cgar_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
128512530 (acsl4b)
00071 Fatty acid degradation
128512530 (acsl4b)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
128512530 (acsl4b)
09143 Cell growth and death
04216 Ferroptosis
128512530 (acsl4b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128512530 (acsl4b)
03320 PPAR signaling pathway
128512530 (acsl4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cgar01004
]
128512530 (acsl4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128512530 (acsl4b)
Enzymes [BR:
cgar01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
128512530 (acsl4b)
Lipid biosynthesis proteins [BR:
cgar01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
128512530 (acsl4b)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of breast milk
128512530 (acsl4b)
Exosomal proteins of breast cancer cells
128512530 (acsl4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
128512530
NCBI-ProteinID:
XP_053341832
LinkDB
All DBs
Position
24:complement(26133362..26149311)
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AA seq
670 aa
AA seq
DB search
MMAECVRACSVSGVPEGPYRAVQCADGLVQEEFEGVNTLDKLFRYAVSRYADGPCVGSRE
VLSVHNETQPGGKVFQKLVLGEYKWKSYVEVEQEVNRLGSGLAALGQRSRSSIAIFCETR
EEWMITAQACFRFNYPLVTLYATLGEDAVAFGLNQCEATHLITSKELLETKLKAVLPDVA
GLKHVIYVGSGGVSVGDYPQSLIIHSLQEVMDLGAKPENLSVQCDPPSPSDLAVVMYTSG
STGRPKGVMMHHSNLIAGMAGQCQRIPGLGPEDTYVGYLPLAHVLELTAEMSCLSHGCRV
GYSSPHTLSDQSSKIQRGCKGDCTVLKPTLIAAVPEIMDRIYKNVMSKVTEMSTLQRVLF
NMAYRYKVQQLEHGADTPICNTMVFRRVSMMLGGCVRLMLSGGAPLSPDTHRFIKVCFCP
VAIGYGLTETSGAATISEFTDYTTGRVGAPLICSEVKLRDWPEGGYTSQDKPHPRGEILI
GGPNVAMGYYGNNGESENGEFWVDKAGQRWFCTGDVGEVHPDGCLQIVDRKKDLVKLQAG
EYVSLAKVEAALKNCPLIDNICVYANSNQNYVISFVVPNQKQLTERANKNGIKGEWEELC
NHPTLEQEVLRTIKEVATTNKLQRFEVPMKVRLSSQVWTPETGLVTDAFKLKRKELQTHY
KNDIDRMYGA
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagagtgtgtgagagcatgcagtgtgtcaggggttcctgaggggccgtaccgg
gcggtgcagtgcgcagacggtctggtgcaggaggagttcgagggcgtgaacacactggac
aaactgttccgttacgcagtgagcagatacgcagacggcccctgtgtggggagcagggaa
gtcctctcagtgcacaatgagacgcagcccggcggaaaggtcttccagaagctggtcctg
ggagagtataagtggaagtcatatgtggaagtggaacaggaagtgaatcgcctgggcagt
ggcctggctgctttgggtcaaaggtcacgcagctccatcgccatcttctgtgagacaaga
gaggagtggatgatcacagcacaggcctgcttcaggttcaactaccccttggtgacactc
tatgctacactaggtgaagatgctgttgcatttgggctgaaccagtgtgaagccacacac
ctcatcactagtaaggaactgctggaaacaaagctgaaggcggtgttgccggatgttgca
gggctgaagcatgtgatctacgtgggcagtgggggtgtgtcagtgggagattacccacaa
tccctcatcatccacagcttacaggaagtgatggatctcggagccaaacctgaaaacttg
agtgtgcagtgtgatcctccctctccgtctgatcttgcagtagtgatgtacactagcggc
tctacaggtcgtcctaaaggagtgatgatgcatcacagtaacctcatcgctggaatggcc
ggccagtgccagaggattccgggtctcggacctgaggacacgtacgttggttatcttcca
ctggctcatgttctggagctgacagctgaaatgtcttgtctgagtcatggctgccgggtt
ggatactcgtcaccacacacactttcagaccagtccagtaaaatacaacgaggctgtaag
ggagactgcactgtgctcaaacccactctgattgctgctgttccagagattatggaccgt
atctataagaatgtgatgagtaaggtaacagagatgagcacactacagcgggtgttattt
aacatggcctacagatacaaagtgcagcagctggagcacggagcggatacacctatatgt
aacacgatggtgtttaggcgtgtatccatgatgctgggtgggtgtgtgaggttgatgctt
agtggtggagctcctctctctcctgacacacaccgctttataaaagtgtgtttctgtcct
gtcgccatcggttacggcctcacagagacatctggagcagcaaccatttctgagtttact
gattataccacaggacgggtcggagcgccactcatctgctcagaggttaaactacgagac
tggcctgagggaggttacaccagtcaggataagccccacccccggggcgagattctgata
ggtgggccgaatgttgctatgggttactacggtaataatggtgagagtgagaatggggaa
ttctgggtagacaaggcgggtcagcgctggttctgtaccggtgatgtgggggaggtccat
cctgacggctgcctgcagatagtcgaccgcaagaaggacctggtgaagctacaggcgggt
gaatatgtgtctctggccaaagtagaggcagcgctgaagaactgtccactgatcgacaac
atctgtgtctacgctaacagcaatcagaactatgtcatcagctttgtggtgcccaatcag
aagcagctgactgagcgggccaataagaatgggattaaaggtgagtgggaggagctctgt
aatcatcccacactggaacaggaagtactaagaactatcaaagaggttgcaacaacaaat
aagctgcagaggttcgaggttcccatgaaggtgcgtctcagttctcaggtctggactccg
gagacaggactggttactgatgccttcaagctgaagagaaaagaattacagacacactac
aaaaatgatatcgataggatgtatggagcttaa
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