Clarias gariepinus (North African catfish): 128512641
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Entry
128512641 CDS
T10780
Symbol
ungb
Name
(RefSeq) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128512641 (ungb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128512641 (ungb)
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
128512641 (ungb)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
128512641 (ungb)
Prokaryotic type
128512641 (ungb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
128512641
NCBI-ProteinID:
XP_053341975
LinkDB
All DBs
Position
24
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AA seq
277 aa
AA seq
DB search
MQCSDNFPAAYTKRVLLMSQEKIYSSGVQLTVEQLKQIEQKRQEALKRRFDRNELMPIGE
SWRKHIGSEFTKPYFTKLMSFVAEERKHFTVYPSKEEVFLWTNMCAFEAVKVVILGQDPY
PRKGQAHGLCFSVPRLSPPPPSLENIFTELAIDIKDFQHPNHGNLTGWAKQGVLLLNSVL
TVRSREPTSHQGYGWEDFTDAVIQTLSRNLKGLVFLLWGSYAQRKGKFIDRSKHHVLETS
HPSPFSAHMGFFGCKHFSKTNILLQASGMIPIDWNAL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgctcagataattttccagcagcatatacaaaacgtgtcttattaatgtctcaa
gaaaaaatatatagcagtggtgtgcagcttacagttgagcagctgaagcaaatagaacag
aagagacaagaagctttgaagaggcgttttgaccgcaatgaacttatgcccattggagaa
agctggcgcaagcatatcgggtctgaattcaccaaaccttacttcactaagcttatgtct
tttgtcgctgaagagaggaaacatttcactgtctatccgagtaaagaggaagtcttctta
tggacaaacatgtgtgcattcgaagctgtgaaagtggtcatccttggccaagacccatat
cccagaaaaggccaggctcatggtctgtgcttcagtgtaccaaggctttcaccaccacct
ccaagcttggaaaatatattcactgaacttgcaatagatatcaaggactttcaacaccct
aatcatggtaacctgacaggatgggctaaacaaggtgttctactactgaactctgtcctg
acagtgagaagcagagagccaacatcccatcaaggttatggatgggaagatttcactgat
gcagtgatccaaaccctaagtagaaatctaaaaggcctggtcttcctgctgtgggggtca
tatgctcagaggaaaggcaaattcattgatcgatcgaagcatcatgttcttgagacaagc
catccctcaccattctctgctcacatgggcttttttggatgcaaacacttctcaaagaca
aacatcttacttcaagcatctggaatgataccaattgattggaacgcactgtaa
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