Clarias gariepinus (North African catfish): 128512655
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Entry
128512655 CDS
T10780
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128512655 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgar01009
]
128512655 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128512655 (ncor1)
Protein phosphatases and associated proteins [BR:
cgar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128512655 (ncor1)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
128512655 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Cytomega_UL84
Motif
Other DBs
NCBI-GeneID:
128512655
NCBI-ProteinID:
XP_053342000
LinkDB
All DBs
Position
24:complement(7015032..7104109)
Genome browser
AA seq
2394 aa
AA seq
DB search
MSSSGFPPSQGSFSSEQSRYPPHSVQYTFSPARHPSEFTLTEYRNAHLQDQQQRRRPSLL
SEFHPGTERPPERRHGYEQQQFHTVSSQPDHEALDAKRPRIEGTNEPHLARVPPTSIVVP
LSHPGQDGLRTPGDIKKETQFSVKLEASSPGGGGIHAMGEEQDASPSKLSKEELIQSMDR
VDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVSPPPVEHKHRSIVQIIYDENRKKA
EEAHKIFEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKI
CQRYDQLMEAWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGT
GLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLMDDP
MKVYKSRQFMNVWTEHEKEIFREKFMQHPKNFGLIATYLERKCVSDCVLYYYLTKKSQNY
KTLMRRNFNSRRRRNQQITRPSQEDKSDDKNEEDKSEKLDKKEEDDKKDEEEKDEKEDSK
DISKDKEKCEGEDEEGKEQNTPRGRKTANSQGRRKGRITTRSMANEAASSATEEPPAAAP
PPPPPPPPPPPAPAPVPEPGAVEAGETSRWTEEEMEVAKKGLVEHGRNWSAIAKMVGTKS
EAQCKNFYFNYKRRHNLDDLLPPPKQASRRLRERDASQSDSVATASADDDEENPDDSEGA
ENTSDTESAPSPSQPDTSKPSESQPQAPDQEATAPKASNADAKAQEPFNELQVKLEKSPE
GAAVDESMVKDEVQLQPKSEPQDTETAGGGGDRDLQVKTEPELREREKQSEQPHSDNDSS
ATCSADEDVEAEPDRQRLFSLEKPSILAGSGSVVVSSSKQAPLSMQQLQQRAATIPPMVS
PPSSLLHFSSSSAALARPRDWERLGHRASPRPPRHVAGPFGTAGVPVGAPLSGLTMFQHQ
IKAVHESAHMEDNQRQEAGEMERRPRFITRSPTVLDRDGKPLTYMSYDIKLMEQEAHAAG
RPGSPYRLSPREPSKASPQPEPNNPARYSIPPVLQPAPNQVVQNLSEGMRVPFARHRTAN
IPSPPPLIPTSKQSDKPTFIQGGSILQGTPGTYLPSHTHAMYEGVKSAGGSISLGLPRQQ
DPAKPVSYIKQEECSPRGQSAQAEGLLSRAQYEGIVRGAPMPTIQDLARASTGKGPEAHS
LRAGSITHGTPALPQSSIPAEMLKVKLTAEDLSSPEKGRGEPLPKGHVIYEGKSGHILSF
DGIKNPREGTRSPRTGYELKRTHEMMEGARGHPGREATPFEGLISRALPRDGSHPDSKER
SILSGSIMQGTPRTSTDAFDEAKYGKQIKRESPPIRSYEGGITKGKPYEGVNTIKEMGRS
IHEIPRKEVPDNRKTPVLEASISQGIPLKYESGGASQSAIKHNVKSLLTSPGKLDDSKVQ
ERMRHASVVSSTSVLRSTHQEASKAQLSPGMYEDANARRTPNYTSGSISRGSPLLRAQEG
GITSGKPVSHERKSTLTPTQRDSNPAKSPVSGGEPLASHSPYDQVYRTVPSGVTHLPPHL
DPNIFHTAPYMFARQPSPTGYHNTYQLYTMENTRQTILNDYITSQQMHVIPRAEVTRGLS
PREQQIAIPYAAGARGIIDLAQMPPTILLPHPGGTGSPSLDRITYLPGPQPPFPPRVFNP
ASISPGHSAHLAASMERERERERERERERDREHREREKEREKERERERERERERERERER
ERMAAASEYIRTSAQEQPGRPGSRGFLRSPSPSMRPQESVVQQRPSIFQGTKSVITPLIR
QMPPAPATAQTSSRYNTAADALAALVDAAASAPQMDVAKVKEGKHEGVGARDDEVSPSRA
MSLPAGKASLSVYPDGGATSGKDKPPPTKSRIEEELRTLGKTTITAASFIDVIITRQIAS
EKDSRERGSQSSDSSGSLSSSRYDGQSSGAIEVISPASSPAQREEKNDRSFSSEKSSQPA
PGPVRGFDIARYRQQVESGPPAAPPPQTHRVMTLADHISHIITQDFAKNQDPPPSSSASS
ASSSISSTFQNSGVLGSSSRSKVTNRYSPENPINPAHHQKPASRVSPENALEKSRSRPGK
SPERAGGRAAESYEPISPPQNYSGLEKQENSLLQGQRRDQDLSEQRTDSRSPGSGNYLPA
FFTKLESTSPMVMSKKQEIFRKSEVGNTQPGTEIFNLPAVTTSSNVNLRNHSYSDPASNL
GLEDIIRKALMGSVDDRQDEQTQQAQSVSSAAGNNSEGRQEANPSPSTGRYSKQKLQSKA
SSRKSKSPNPGQGYTGGERPSSVSSVHSEGEYHRQAPSWAWEDRPSSTGPMQFPYNPLTM
RMLSSTPPTSMACPSPSMQSQQQPGGGASAPTRAWEREPPLLSEQYETLSDSDD
NT seq
7185 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagctcaggcttcccccccagtcaggggagcttcagcagcgagcagagccgctac
ccgccccactcagtacagtacaccttcagtcccgcacggcatccatcggagttcacactt
acagaataccgtaatgctcacctgcaggaccagcagcagcgccgtcgaccctcattgctg
tcggaattccatcctggaaccgagaggcctccagagcgccgtcacggctatgagcagcag
cagttccacaccgtttcgtcccagccggatcacgaggccctggatgccaagcgtcctcgc
atcgaaggcaccaacgaaccccacctggcccgtgtgccgcccaccagcatcgtcgtgcct
ctgtcacaccctggacaggacggcctgagaaccccaggggacatcaagaaggagacgcag
ttcagcgtgaagctggaggcttcgtccccaggaggtggagggattcatgccatgggggag
gagcaggacgcgtctccttccaagctctccaaagaggagctgatccagagcatggaccgc
gtggaccgtgagatcgccaaggtggagcagcagatctttaaactcaagaagaaacagcaa
caactggaggaggaagcagcaaagccagtggagccggaaaagccggtgtctcctccccct
gtggagcacaaacaccgcagcatcgtccagatcatctacgacgagaaccggaaaaaagca
gaggaagcccataagatctttgaaggactcggccctaaagtcgagctgcccctgtacaac
cagccatcggatactaaggtctaccacgacaacattaagacaaatcaagtgatgaggaag
aagctgattctgtttttcaagaggaggaaccacgcacgcaaacaaagggaacagaaaatc
tgccagcgctacgaccagctgatggaggcgtgggaaaagaaggtggagcggatggagaac
aacccacggcgtaaggccaaagagagtcgcacgcgcgagtactacgagcgccaattcccc
gagatccgcaagcagcgcgagcagcaggagcgtttccaaagggtgggacagagagggaca
ggactgtctgctaccatagcgaggagcgagcatgagatctctgaaatcatagacggcctc
tcggaacaagagaacaacgagaagcagatgaggcagctatcagtcatccctcccatgatg
tatgactcggagcagaggcgtgtgaagttcatcaacatgaacggccttatggacgacccc
atgaaggtttacaagtctcgccagttcatgaacgtctggaccgagcacgagaaggagatt
tttagggagaagtttatgcagcacccaaagaactttggccttattgccacttatctcgaa
cgtaagtgtgtctcagactgtgtactgtattactacttgaccaagaagagccagaactat
aagacactgatgcgacgcaactttaacagccgtcgtcgaagaaaccagcagataacacgg
ccctcacaagaagacaagtccgacgacaagaacgaggaggacaagtcggagaaattggac
aagaaagaggaagacgataagaaggacgaggaagagaaagatgaaaaagaggactcgaag
gacattagcaaagacaaagagaagtgtgagggagaggacgaggaggggaaggagcagaac
acgccacgcggccggaagactgctaacagccagggacggcgcaagggccgaatcacgaca
cgctccatggccaacgaagctgccagtagtgctacagaggaaccaccagcagcagcgcca
ccgcctccaccaccaccaccaccaccaccaccggcaccagcaccagtacccgagcctgga
gctgtagaggccggagagacttctcgctggacagaggaggagatggaggtggccaaaaaa
gggctggtcgagcatggcaggaactggtcagccatcgctaaaatggtgggtaccaagagt
gaagctcagtgcaagaacttctacttcaactacaagaggcggcacaacctggacgacctg
ctgcctccgcccaaacaggcatccaggcgcttgcgtgagcgagatgcatctcagagcgac
agtgtggccacggcttccgctgacgatgatgaagagaacccagacgacagtgaaggtgca
gagaacacttcagacacggagagcgcgccgtctccctctcagccagacacgtccaagccc
tcggagtcccaaccccaagccccagatcaagaagctaccgcccccaaagcatctaacgcg
gacgccaaagctcaggagcccttcaacgagctgcaggtaaagctggaaaaaagtcccgaa
ggagcagcggtggacgaatccatggttaaggacgaggtccagctgcaacctaagagcgaa
cctcaggacacagagacagcaggaggaggaggagaccgggatttgcaggtaaagaccgag
ccagagttgagggagagagagaagcagagcgagcagccgcattccgacaacgactcaagt
gccacctgcagcgccgacgaagacgttgaggcagagccagacagacagaggttgttctct
ctggagaaaccgtcgattctcgccggctctggatcagtcgtggtgtcctccagcaagcag
gctccgctcagcatgcagcagctccagcagcgtgccgccaccatcccgcccatggtcagt
ccccctagttccctccttcacttctctagcagctctgccgccctggccaggcccagggac
tgggagaggcttgggcacagagcctcgccccggccgcctcgccacgttgcaggtccgttt
gggacggctggtgttcctgtaggagctcctctgagcggcttaaccatgttccagcaccag
atcaaagcagtgcacgagtctgcgcacatggaggacaaccagagacaagaggccggagag
atggagcgtaggccgcgcttcatcacacgcagccccaccgttctcgaccgagatggtaag
ccacttacctacatgtcgtacgatataaagctgatggagcaggaggctcacgctgcagga
agaccaggttcaccctacagactgtcccctcgagagccaagcaaagcatcaccccaacct
gagcctaacaaccctgcccgctacagcatcccaccagtcctgcagcccgctcctaaccag
gtggtccagaacctctcggagggaatgcgtgtgccattcgcccgccacaggaccgcgaac
attccatccccgcctccgctcatcccgacgtccaaacaatcggacaagcccaccttcatc
cagggaggatccattttacagggaacgccaggcacgtatctgccctcacacactcatgcc
atgtatgagggagttaagagcgctggaggatccatctctctgggactgccaagacaacag
gaccctgccaaacctgtgtcctacataaagcaggaggaatgttcaccccgtgggcaaagt
gctcaggctgaagggcttctctccagggcgcagtatgaaggaatagtccgaggagcgccg
atgcctaccatccaggatctggcaagagcatctactggaaaaggccctgaggcacactcc
ttaagagcaggatccatcacacatggcactccagctcttccacagtccagcataccggca
gaaatgctaaaggtcaagctgactgctgaggacctgagcagcccagagaagggccgagga
gagccactgcctaaaggccacgtcatctacgagggcaagagtggtcacatcctgtcgttt
gatggcattaagaaccccagagaaggtactagaagccccaggacgggatatgagttaaaa
cgcacacacgagatgatggagggagccagaggacatcctggaagggaggccacacctttt
gaaggtctgattagcagggcgttgcctagagatggctcacaccccgactccaaagagcgg
tccatactctcaggatccattatgcaagggacacctcgaacctccactgacgcttttgac
gaggccaagtatggtaaacagatcaagagggaaagtccaccaatccgctcctacgaaggg
ggaatcaccaaaggcaagccgtacgagggcgtgaacaccattaaagagatgggacgctct
attcatgagatccctcgcaaggaagtacccgacaaccgcaagacccccgtcttggaagca
tctatttctcaaggcatccctctgaagtatgagagcggtggcgccagccagtcggccatc
aagcacaatgttaagtcccttctcaccagcccggggaaactggacgactccaaagtacaa
gagcgcatgcgacacgcatcagtcgtcagctccacttcagtgctgcgctccacacaccag
gaggcaagcaaggctcagctcagcccagggatgtacgaggacgcgaatgcccgcaggacc
cccaactataccagcggctccatttccagaggatcacccctgctgcgggcacaagagggg
ggcataacgtccgggaagcctgtgtcccacgagagaaagagcacgctcaccccaacccag
agagacagcaacccggccaagtctcctgtatccggaggtgagccgctggcctctcacagc
ccctacgaccaggtgtaccgtaccgtaccgtcaggtgtaactcacctgccccctcatttg
gatcctaacattttccacacagcgccctacatgtttgcacgacagccgtcccccaccggc
taccacaacacataccaactgtacaccatggagaacacgcgccagacgatcctgaatgac
tacatcacctcgcagcaaatgcacgtcatccctcgagccgaggtcaccagaggcctgtca
cccagagagcagcagatcgccatcccgtacgctgctggagccagaggtataattgatcta
gcccagatgcctcccaccatcctgttgcctcaccctgggggaacaggttcccctagcttg
gaccgcatcacgtacctccctggacctcaacccccttttcctcctagggttttcaaccca
gcctccatatctccaggacactctgcacatctcgcagccagcatggagagggaaagagaa
cgggaaagagaacgagaaagggagcgcgatcgtgaacacagagaacgagagaaagagagg
gagaaggaacgagagagggagagagagagggaacgagagagggagcgggaacgtgagcgc
gagcgtatggcagccgctagcgagtacatccgtacatcagctcaagagcagcctggcaga
cccggtagccgtggtttcctacgttccccgtccccctcaatgaggccccaggagagtgta
gtccagcagaggcccagcatcttccagggcacaaagagtgtcatcacacctctgatcagg
cagatgccccctgcaccggccaccgcacagacttcgtcccgctacaacacggcggcagat
gcgctggctgcactggtggacgccgctgcttccgcaccccagatggatgtcgcgaaggtc
aaagagggtaaacacgagggcgtcggtgcccgtgacgacgaggttagcccctcgcgagcc
atgtcacttcctgctgggaaggcatcactttctgtatatccagacggaggcgcgacgagc
ggcaaagataaaccgcctccaaccaagtctcgcatcgaggaagagctgcgcacgctcggc
aagactaccattaccgcggccagcttcatcgacgtcatcatcacccgtcagatcgcgtct
gaaaaagactcgcgcgagaggggctcccagagctcggactcctcaggaagcttgtcttcg
agtcgttacgatggacagagcagtggagccatcgaggtgattagcccggcaagttctccg
gctcagagagaggagaagaacgaccggtccttctcctcagagaagagctctcagccagcc
ccaggccccgttagaggattcgatatcgctcgctacaggcagcaggtggaatcgggccct
ccagcagcgccacctccacagacccaccgggtcatgaccctggctgatcacatctcgcat
atcataacccaggactttgccaagaatcaggaccctcccccttcttccagcgcttcttcc
gcctcttcctcaatctcttctacattccaaaactccggagtattaggcagcagctctcgc
tccaaagtgacaaatcgatacagtccggagaatcccatcaaccccgcccaccatcagaaa
ccagccagtcgagtgtcccccgagaacgccttggagaaatccagatccaggccaggtaaa
tcccctgaacgtgccggtggccgggccgctgagagttatgagcccatctccccaccacaa
aactactcggggctggagaaacaagagaacagtctgcttcagggccagaggcgtgaccag
gacctttcagagcagagaacggactcgcgctccccaggcagcggcaactatttgcctgct
ttcttcaccaagctcgagagcacgtcccccatggtgatgtccaagaaacaggagatcttc
cgcaagtctgaagttggtaatacacagccaggcacggagatctttaatttaccagcagta
acaacctcaagtaatgtgaaccttcggaaccactcctacagtgacccagccagcaacctc
ggtctagaggacatcatccgtaaggctctgatggggagcgtagatgatagacaggatgag
cagacacaacaagctcagtctgtttcttcagcagcaggaaataactctgaggggcgacag
gaggctaatccgtctcccagcacaggtagatattcgaagcagaagctccagagcaaagcc
agcagcaggaagtccaagtcgcccaacccgggccagggatacacaggtggggagcgaccc
tcttctgtctcctctgtacattctgaaggagagtatcacagacaggctcccagctgggct
tgggaagatcggccctcatctacaggtccaatgcagttcccgtacaaccctctgaccatg
cgcatgttgagcagcacacctcccacctccatggcctgcccatctccctccatgcagtcc
cagcagcagccagggggaggagccagtgcgccgactcgtgcctgggagagggagccgccg
ctgctctcagagcagtacgaaaccctctcggacagtgacgactga
DBGET
integrated database retrieval system
