Clarias gariepinus (North African catfish): 128512740
Help
Entry
128512740 CDS
T10780
Symbol
zeb1a
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128512740 (zeb1a)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
128512740 (zeb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
Zn_SUZ12
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
128512740
NCBI-ProteinID:
XP_053342114
LinkDB
All DBs
Position
25:complement(11925341..11992909)
Genome browser
AA seq
1233 aa
AA seq
DB search
MADGPRCQRRKQSKPRRNNVRSFSNVSEAPSDSDDEDKLHIVEDDSIPDSSEEKPSVFQQ
LHKEHTLNDGNLGPDALIREIRVKEECLTDEEDEEVQINETSRQGKTEVICPDIPKEEQS
TPEGGVHDENGTSDEISQLYSCPYCSRRYKRHTSLKDHIKLHHEKNKEDFSCSLCSYTFT
YRTQLDRHMNTHKNGRDQSMVSHSGGNRKFKCTECSKAFKYKHHLKEHLRIHSGEKPYEC
SNCKKRFSHSGSYSSHISSRKCVAVPPAVNGLSHSPGIKAALTLTRPTRILLREKLDTGK
ALEEPLSPKKIKEEPDEHELKPVRTTSVVSTTTVTSTSTTTNGGGISVQTAPPGVVQTLL
LPTVGLVQPISINLRDLQNMLKVTVDGNMMWQTVASSNTNGTCSKIVNPGQPQAQAMIVQ
TAHSHLQVISAISLPVLDQDGNSKIIINYNVDPQISTSDSNTAQSVLPPQTVAQTKVQEP
NMAPPELGKVISIKHPKMAQTITAQPNVSPAPKSPTSGQVPAQISILKSTQSAVPNKATS
IIKVTKLVPGQTKHTQPALLLLKTVNGSPGMVVRQLAAVNPQVTPTIGTTGLKSTPEYTI
MKAKQNSLNKLSPVGEETSTPRDNCQPAAMGSTFLKGIQLKNESEFKNKTECKETLQIEK
ERKEGLMAQSDSTTPHRSVVCGDGFHNYATCLFCDNSPSNTDILNYLNSIEQGSDKCLSS
LLGKDNFESADQPPVKSLLPLIEAYSKNSHPGEEQLSRVAELVSLPVDVVSRWFQRMRLK
NILLDYPENPLNGQQTIANSQQDSSMDTNTQILETSAEESVSQNSDPSPLNLTTNYLSII
KTEDLEEKGQVEPLDLSLPKSSFCNSNTSVTSEVSATKPSVTTQEEPINLTCFKKDTLDG
NTIYVTQSTTSPINIIATPLPTLVAIAEPGGIPCLRSAISTKQRTILIPQLSYTYTSPST
NKANTTPSTITPPNTDMQGGVLNGCQEKIDAGNESLSGWEGLNDSNLSPNKKRRKIHGGQ
YACDLCDKIFQKSSSLLRHKYEHTGKRPHECGVCKKAFKHKHHLIEHSRLHSGEKPYQCD
KCGKRFSHSGSYSQHMNHRYSYCKKEVYDQPEPNNTSSTPPSQLDSDERESEAEEEIYDD
EEPDEEKDCDEDFSVFDMSDIRVVRVGEEYYEEEEEVGMAEKKQVRQNPVELCTPQKEMV
KTLGMGDLMDRNTEEEIGKPMKNDLFNDTVENK
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgccagcgcagaaagcagtcgaaaccgaggagaaataacgtg
agaagtttttcaaatgtgtcagaagcaccttcagattctgatgatgaagataaactccac
attgtggaggatgacagtattcctgacagttcagaggaaaagccgtcagtatttcagcag
ctgcacaaggaacacacattaaatgatggcaacctggggccagatgctttgatacgagaa
ataagggtcaaagaggagtgtttaacagatgaagaggatgaagaagttcagataaatgaa
acctcaaggcagggaaagacagaggtcatttgtccagacattccaaaggaggaacagagc
acaccagagggaggagtccatgatgagaacggtacatctgatgagatttctcagctttac
tcatgtccgtactgttcccggagatacaagcgtcacacatctctgaaggaccatataaaa
ctgcatcatgagaaaaacaaggaggacttcagttgctccctttgcagctacactttcacc
tatcgcacacagcttgaccgacacatgaacacacacaaaaatggaagagatcagagtatg
gtttcacattcaggaggaaacagaaagttcaaatgtacagaatgttctaaagcttttaaa
tataagcatcatctaaaggagcacctacgcatccacagtggtgagaagccatatgagtgt
tctaactgtaagaagcgcttctcccattctgggtcctacagttctcatatcagcagtagg
aagtgtgtagcagttccccctgctgttaatggattgtcccactctcctggaatcaaagca
gctcttactcttactcgccctacacgtatccttttgcgggagaagttagacactggtaaa
gctttggaggaaccgctatctcctaagaagattaaagaagagcctgatgagcatgaactt
aaacctgtcagaactacatcagttgtttctacaactactgtcacctctaccagcacaact
actaatgggggtggaatttctgttcagactgctcctcctggtgtagtacaaacattactt
ctacctactgtgggtctagttcagccaattagcatcaacctacgagacctccaaaacatg
ctgaaagtgacagtggacggaaacatgatgtggcagactgtggctagctcgaatactaat
ggaacttgtagtaagattgttaatccaggccagccacaagcacaagcaatgattgtgcag
actgcccattctcatttgcaagtcatttctgcaatctctctacctgtgctggatcaggat
ggaaattccaaaattatcataaactataatgtagacccacagattagcacatcggattcg
aacacagcacagtcagtattgccacctcaaactgtggcccaaacaaaagtgcaagagcca
aatatggcaccaccagaactgggaaaggtgatttcaataaaacacccaaagatggcacaa
actatcacagcacagccaaatgtctcaccagccccaaaatcacccacctctggacaagta
cctgcacaaataagtatacttaaatccacgcagtcagctgttccaaataaagcaacgtcc
attataaaggtcacaaagctagtaccaggacaaacaaagcatacacagccagcactgttg
cttttaaaaacagtcaatgggtccccaggaatggttgtgagacagttagcagccgtgaac
ccacaagtaactccaacaataggaactacaggtctgaaatcaactccagaatataccatc
atgaaagcaaaacaaaattcactaaataaactgagtccagttggagaagagaccagtacc
cctagggacaactgccagcctgcagccatggggtcaactttcctaaagggaattcagtta
aaaaacgaaagcgagtttaagaataagacagaatgtaaagaaactttacagatagagaaa
gaaaggaaagagggactgatggcccagagtgattcaacaactcctcacagaagtgttgtt
tgtggtgatggcttccataactatgctacatgtcttttttgtgacaacagccccagcaac
actgatatcttaaattatctcaacagcattgaacaaggatctgacaagtgtctctcttct
ctgctggggaaggataattttgaaagtgcagatcagccaccagtgaagagtcttttgccc
ctaattgaggcgtacagcaaaaactcacaccctggtgaagagcagctctctcgagttgcg
gaattggtcagtttgccagtggatgtggtcagtagatggtttcaaagaatgcgcttaaag
aacatactacttgactaccctgaaaatcccctaaatgggcaacagactattgcaaactct
caacaagattccagtatggacaccaacacccaaattctggaaacttcagctgaggagtca
gtgagccagaacagtgatccttctcctctaaacctcactacaaattatcttagcatcata
aagacagaggatctggaagagaaagggcaggttgaacctttggatctctcacttccaaag
tcctctttttgtaatagtaacacctctgtcaccagtgaggtgtcggccacaaagccatct
gtcaccacccaagaggaaccgataaatctcacatgtttcaagaaagacacattggatgga
aacaccatatatgtgacacagtccactacaagtcctataaatatcatagccacacctttg
ccaactcttgttgccatagcagagcctggtggaatcccctgcctcagatctgctatctct
accaaacagcgcacaatcctcatcccccagctgtcctacacgtacacttccccttcaacc
aacaaggctaacaccactccttccactatcacgccaccaaacacagacatgcagggagga
gtactaaatggctgtcaggagaagattgatgctggaaatgaatccttgtctggatgggaa
gggctgaatgacagcaacctttcccccaacaagaagagacggaagatacatggtggccag
tatgcatgtgacctatgtgacaagattttccagaaaagcagctctttactacgtcacaaa
tatgaacacacaggtaaacgtcctcatgagtgcggagtctgtaaaaaggcatttaaacac
aagcaccacctaattgagcactcgcgtctgcactccggggagaagccgtaccagtgtgat
aaatgtggcaaacgcttctcacactccggctcttactcccaacacatgaaccatcgctac
tcctactgcaagaaagaggtttatgaccagccagagccaaataatacttcatctacacct
ccctcacagcttgactcagatgagagggagagtgaagctgaggaggagatatatgacgac
gaagaaccagatgaagaaaaagattgtgatgaagatttttctgtctttgacatgagtgac
ataagagtagttagggtcggtgaggaatattatgaagaggaggaggaagtggggatggca
gaaaaaaaacaggtgagacaaaacccagtggagttgtgtactccgcaaaaggaaatggta
aaaactttgggcatgggagacctgatggacaggaacacagaggaggaaatagggaaacca
atgaaaaatgatttgtttaatgacactgtagaaaacaagtaa
DBGET
integrated database retrieval system
