KEGG   Clarias gariepinus (North African catfish): 128512792
Entry
128512792         CDS       T10780                                 
Name
(RefSeq) alpha-actinin-4 isoform X1
  KO
K05699  actinin alpha 1/4
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar04510  Focal adhesion
cgar04517  IgSF CAM signaling
cgar04518  Integrin signaling
cgar04519  Cadherin signaling
cgar04520  Adherens junction
cgar04530  Tight junction
cgar04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    128512792
   04518 Integrin signaling
    128512792
   04519 Cadherin signaling
    128512792
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128512792
   04520 Adherens junction
    128512792
   04530 Tight junction
    128512792
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    128512792
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgar04131]
    128512792
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cgar04812]
    128512792
   04147 Exosome [BR:cgar04147]
    128512792
Membrane trafficking [BR:cgar04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    128512792
Cytoskeleton proteins [BR:cgar04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     128512792
Exosome [BR:cgar04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   128512792
  Exosomal proteins of colorectal cancer cells
   128512792
  Exosomal proteins of bladder cancer cells
   128512792
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 EF-hand_5 Uds1 FAZ1_C
Other DBs
NCBI-GeneID: 128512792
NCBI-ProteinID: XP_053342186
LinkDB
Position
25:complement(25526628..25551530)
AA seq 899 aa
MVDYHAANNPSQYSAQQSYMEQENDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIE
NIEEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIGAE
EIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHISW
KDGLAFNALIHRHRPELINYDKLRKDDPVTNLNNAFEVAEKYLDIPKMLDAEDIVNTARP
DEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRT
IPWLENRAPEKTMVEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRPAF
MPSEGRMVSDINGAWHNLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHESWTDGK
EAMLNQKDYETASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVN
ARCQKICDQWDVLGALTHNRRESLERTEKQLESIDELYLEYAKRAAPFNNWMEGAMEDLQ
DMFIVHNIEEIQGLITAHEQFKATLPEANKEREAIQAIQAEVQKIAQYNGIKLSGTNPYT
SITPNSIDSKWDKVQQLVPQRDVALQEELGRQQSNDHLRRQFANQANMVGPWIQNKMEEI
GRISIEMNGTLEDQLTHLRQYEQKIIEYKPNIEQLEGNHQLIQEALIFDNKYTAYTMEHL
RVGWEQLLTTIARTINEIENQILTRDAKGISQEQLHEYRASFNHFDKDHSGALAAEEFKA
CLISLGYDVENDKQGDAEFARIMSGVDPNNTGAVTFQAFIDFMSRETTDTDTADQVIASF
KILAGDKNYITAEELRRELPPDQAEYCISRMAPYRGSDAAPGALDYMSFSTALYGESDL
NT seq 2700 nt   +upstreamnt  +downstreamnt
atggtagattatcacgcggcgaataatccatcgcagtactcggcgcagcaaagctacatg
gagcaggagaacgactgggaccgagacctgctgctcgacccggcctgggagaagcagcag
aggaagacgttcacggcatggtgtaactctcacctgcgtaaagcagggactcagatcgag
aacattgaggaggacttcagagacggactgaagctcatgctcctgctcgaggtcatctca
ggtgagaggttacccaaacccgagcgagggaagatgagagtgcacaaaatcaacaacgtc
aacaaagcgctcgacttcatcgccagcaaaggagtcaaactggtgtctattggagctgag
gaaattgttgatgggaatgcgaagatgacccttggtatgatctggaccatcatcctccgc
ttcgccatccaggacatctcagtggaggagacctcggcgaaggaggggttgttgttatgg
tgtcagagaaaaacggctccttacaaaaatgtcaacgtgcagaacttccacatcagctgg
aaggatggtttggcctttaacgctctgatccacagacacagacctgaactgatcaactac
gacaaactgcgcaaggatgatcctgtcaccaacctgaacaatgcctttgaagtggctgag
aaatacctggacattcccaagatgttggatgcagaagacatagtgaacacagctcgtcct
gatgagaaagctataatgacctatgtgtccagtttctaccatgccttttctggagcgcag
aaggccgagacagcagccaatcgcatctgtaaggtcctggctgttaatcaggagaacgag
cagctgatggaggattacgagaaactcgccagtgatctgttggagtggatcaggaggacg
atcccgtggttggagaacagagctccagagaagacgatggtggagatgcagcagaagctg
gaggacttcagagattaccgtcgcgtccacaaaccacccaaagtccaggagaaatgtcag
ctggagatcaacttcaacacgctgcagaccaaactgaggctcagcaaccggcccgcgttc
atgccgtctgagggacgcatggtgtctgatattaatggggcgtggcataacctggagggg
gcggagaaaggctatgaggagtggctactgaatgaaatccgccgtctcgagagactcgac
cacctcgctgagaaattccgccagaaagcagcgatacatgaaagctggaccgatggtaag
gaggccatgttgaatcagaaggactacgagacggcgtctctgtctgagattaaagctctg
ctgaagaaacacgaggcgtttgagagcgacctcgccgctcaccaggaccgcgtggagcag
atcgccgccatcgcacaggagctcaatgagctggactactatgactctccgagtgtgaac
gctcgctgtcagaagatttgtgaccagtgggacgtgctgggagcgctaacacataaccgc
agggagtcactcgagaggacagagaagcagctggagtcgattgatgagctgtatctggag
tacgcgaagcgagcagctccgtttaataactggatggagggagcgatggaggacctgcag
gatatgttcatagtgcacaacatcgaggagatacagggtctgatcacagcccatgagcag
tttaaggcgaccctcccagaggcgaataaggagcgcgaggccatccaggccatccaggcc
gaggtgcagaagatcgctcagtataacggcatcaagctgagcggcaccaacccctacacc
tccatcacacccaacagcatcgacagcaagtgggacaaggtgcagcagctggttcctcag
cgtgatgtggctctgcaggaggaactcggccgtcagcaatctaacgatcatctgagacgc
cagtttgccaaccaggccaacatggtgggaccctggatccagaacaagatggaggagatc
gggcggatatcgatcgagatgaacggcactctggaggatcagctgactcacctgcgtcag
tacgagcagaagatcattgagtacaaacccaacatcgagcagctggagggaaatcaccag
ctcatccaggaggcgctcatcttcgacaacaagtacaccgcttacaccatggagcatctg
cgtgtgggatgggagcagctcctcaccaccatcgctcgcaccatcaacgagatcgagaac
cagattctcacccgcgacgccaaaggcatcagtcaggagcagctgcatgagtacagagcc
tccttcaaccacttcgacaaggaccacagcggcgctttagcggccgaggagttcaaggcg
tgtttgatcagtctgggttacgacgtggagaacgacaaacagggcgatgctgagtttgcg
cgcatcatgagcggtgtggaccccaacaacaccggcgccgtgacgttccaggccttcatt
gacttcatgtcgcgggaaacgacagacacggacacggcggatcaggtcatcgcctccttc
aagatcctcgctggagacaagaactacatcacggcggaggagctgaggcgcgagctgccc
ccggatcaggctgagtactgcatctcgcgcatggcgccctacagagggagcgacgccgcg
cccggggcgctcgactacatgtccttctccaccgctctctacggagagagcgacctctaa

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