Clarias gariepinus (North African catfish): 128512797
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Entry
128512797 CDS
T10780
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgar01009
]
128512797 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgar03021
]
128512797 (rpap2)
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
128512797 (rpap2)
Protein phosphatases and associated proteins [BR:
cgar01009
]
HAD phosphatases
Fcp/Scp phosphatases
128512797 (rpap2)
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
128512797 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
128512797
NCBI-ProteinID:
XP_053342192
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All DBs
Position
25:23652052..23666603
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AA seq
607 aa
AA seq
DB search
MERSMDAGGKKRARASKTKKGGQAAQIRTAEEEAKRKEVLKETLREKLELERRALQVVDR
LLDDNVQEDFLIDCARLIAPANYSDAVEERFIARMCGYPVCSNKLTKVPTQQYKISTKTN
KVYDITERKCFCSNFCFKASKYLEAQISKTPLWLRKEERPPEVKLLKKGDGGTSGLEIKL
SDRPLSISDVENPISEAPGSLGGSSGNEDSDEEQGFVSSVVAREQPQQQRRVRWGDLPTR
HDGEKQTHDGDAEVRRVRRERDKHGDDVKVRDSGSVDETSELLQQVTLSDAPASPEHSLN
TNLIISQVGMSRKTAAGLRNLLKSRGNAGAEAPTVTLGLLESLTHTLMEWRTEETMRFLY
GADYTSHTEAELQSVDDEEEEEEEEEEEELDEDDLEDVEKVQRSGRPSGGGGGGGGGAQA
RPSAPAPDYEALRREAALLEVRVHEFYRGALVLPEETQTQAVEEKTHVEEREDAPPLPLV
DSKAQRAIQRRIVVEKLCRSLQDVAGPLGVTMSEIINDVNAIVRTFRFTNLNIIHKPPEW
TLIAVILLSALTEVSPSLRESMTRTGSVEYISLLMKELRLKDEDLQSLVKLFKPERKAHA
VQQNRNK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaagcatggacgccgggggaaagaaacgagctcgcgcttctaaaactaagaaa
ggtggacaagcagctcagatcaggacagctgaagaggaagccaagaggaaggaggttttg
aaggagacgctgagggagaagctcgagttggagcggagagctctccaggtggtggaccgg
ctcctggacgacaacgtgcaagaggatttcctcatagactgtgctcgactgatcgcacca
gcaaactacagtgatgccgtggaggaacgcttcatcgccagaatgtgtggctatcccgtc
tgttccaacaaactcactaaagttccaactcaacagtataaaatttccaccaagaccaat
aaggtgtatgacatcaccgagcgtaagtgcttctgtagtaatttctgcttcaaagcttcc
aaatatctcgaggcccagatatccaaaacgccgctgtggctgaggaaggaggagagacct
cctgaggtgaagctcttgaagaagggagacggagggacgtcgggtctggagataaagcta
tcagacagacccttaagcatatcggacgtcgagaatccgatctcggaagcgcccgggtcg
ctgggaggctccagcgggaacgaggacagcgatgaagagcagggcttcgtgtccagcgtg
gtggcccgagagcagccgcagcagcagaggcgtgttcggtggggggatctgcccacacga
catgacggggaaaagcaaacgcacgacggtgacgccgaagtgagacgtgtgagacgagag
cgagacaagcacggtgatgacgttaaagtcagggactccgggtcggtggatgaaaccagc
gagcttctacagcaggtcactctgtctgacgctcctgcttcacctgaacactctctaaac
acgaatctcatcatctcccaagtggggatgagcaggaagaccgccgccggactcagaaac
ctgctaaagagccgcgggaatgcgggtgctgaagctccgacggtcacactcggcctgctg
gagtctctcacacacaccctgatggagtggaggaccgaggagaccatgaggttcctgtat
ggagcagattacacctcacacaccgaagctgagctgcagagcgttgatgatgaggaggag
gaggaggaggaggaggaggaagaggaactggatgaagatgacctagaggatgtagagaag
gtgcagcgttcaggacgaccttcaggaggaggaggaggaggaggaggaggagctcaggct
cgaccctctgcaccagcacctgattatgaggctctgaggagagaagcggcgttgctggag
gtccgagtgcacgagttttacagaggagcgcttgtcctgcctgaggagacgcaaacccag
gccgtggaggagaaaacacacgtcgaggagagggaggacgccccgccgctgccgctcgtc
gactccaaggctcagcgagcgatccagaggcgcattgttgtggagaagctctgcaggagt
ttacaagacgtcgccgggccgctgggtgtgaccatgagcgagatcatcaacgatgttaac
gccatagtccggaccttcagatttacaaaccttaacatcatccacaagcctcctgaatgg
acattaattgctgtcattttgctttctgcgttaaccgaagtgtctccgtcgctgagggag
tcgatgacgaggacgggttcagttgagtacatcagcttgctcatgaaggagctcagactg
aaagatgaagatctacagagcctcgtgaagctcttcaagcctgagagaaaagcgcacgct
gtacagcagaaccgcaataaataa
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