Clarias gariepinus (North African catfish): 128512846
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Entry
128512846 CDS
T10780
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128512846
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GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
128512846
NCBI-ProteinID:
XP_053342276
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Position
25:complement(12129661..12139726)
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AA seq
626 aa
AA seq
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MESTMCIPMPEPICLVENVNNSLRVNDRAIEYLSRNNQPVVVVSVVGLYRTGKSYLMNRL
AGKQTGFALGSTVESKTKGIWMWCTPHPQKPGHTLVLLDTEGLGDVDKGDSKNDTWIFCL
AVLLSSTLVYNSRGTIDNTAVENLHYVTELAEQIKIKSPASRAAEEDEENDSHFVQFFPN
FIWTVRDFSLELVIEKKGKVTEDEYLDFALQLKKGFSKKDTAYNLPRQCIRNYFPTRKCF
VFPFPASQDKMLQLENLDESDIWPQFLTVTQRFCDYVFFVSKIKTVKGGYKVTGRMFGHL
VQSYVETISSGKIPCLENAVVEMARIENQTAVEEGLKLYQSGMEEVKSLFPVSLSVISDK
HKTLSNMANTEFIKLSFKDAEGQYFRKLMEAVNKHYCELTAQNLMASERKCQEILSDLNR
KISERVQNGEFAKPGGYKLYCTEKDNIIIQYHNHPDKGIQAEEVLKNFLSEKCMETKLIL
QTDEQLTASEKKIQEETEQKSLLERQYKVEQESKVEMERLMQEEQQNQKQQLQQMEKKFE
EEKVQQQQQLEKALESKVNEQKELIQKGFNEKAQLMQLEMEQLKKEKDELSRSFFKDYVV
PGFDIAKELLLVYMKYKGIKEKFPKT
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaccatgtgcatcccaatgccagagcctatctgtttggtggaaaatgtgaac
aactcactgcgtgtaaatgatagagcgattgagtacttgtccaggaataaccagccggtg
gttgtggtgtctgttgtgggactctatcgcactggaaagtcgtacctcatgaaccgcctg
gcaggaaaacaaactggctttgcgctgggcagcacagttgaatcaaagactaaaggtatt
tggatgtggtgcacgccacatcctcaaaaaccaggacatacactggtgctgcttgacact
gaaggactgggggatgttgacaagggagactctaaaaatgacacctggatcttctgtctg
gctgttctacttagtagcactctggtctacaacagccgtgggaccatcgacaacactgca
gtggaaaatctacactatgtcactgaacttgcagaacagattaagatcaaatcacctgca
tccagagcagctgaggaagatgaagaaaatgactctcattttgtgcagttttttcccaac
tttatctggacagttcgtgatttttcactggagctggtgattgaaaaaaagggcaaagtg
actgaggatgagtacctggactttgcgctacagctgaagaaaggatttagcaagaaggac
accgcctacaatcttccaaggcagtgtattcgaaactattttccaacccgcaagtgcttt
gttttcccgtttcctgcctcccaggacaaaatgcttcagcttgaaaacctggatgaaagt
gacatttggccacagtttctgactgtcacacagcgattctgtgattatgttttttttgta
agcaaaattaaaacagttaaagggggatacaaagtcacaggaagaatgtttggtcaccta
gtgcagtcctatgtggagacaatctctagtggaaaaatcccttgtctggagaacgctgta
gttgaaatggcaaggatagaaaaccagacagctgtggaggaggggcttaaactgtaccaa
agtgggatggaagaggtgaagagtttgtttcctgtcagtctgagtgtaatttctgataag
cacaagacgctcagcaacatggccaacactgagtttattaaactctcctttaaggatgca
gaagggcaatactttagaaaactgatggaggcagtaaataaacactattgtgaactaact
gctcagaacctaatggcatcagaaaggaagtgccaggagattttgtctgatctaaacagg
aagataagcgagcgtgtgcagaatggtgaatttgcaaagcctggaggatataaactttac
tgcacagaaaaagacaacatcattatccagtatcacaatcatcctgataagggaatccag
gctgaggaggtgttgaagaactttctgagtgagaagtgtatggagacaaaattaattctc
cagactgatgaacaactgactgcaagtgagaaaaagattcaagaggaaacagaacaaaaa
tctctgttagagaggcaatataaagtagaacaggagagtaaggtggagatggagcgactg
atgcaggaggaacaacagaaccagaagcaacaactgcagcagatggagaagaagtttgag
gaggagaaagttcagcagcagcagcagctggagaaagcgctggagagcaaagtgaacgaa
caaaaagaacttattcagaaagggtttaatgagaaagcccagctgatgcaactagagatg
gagcaacttaaaaaagaaaaagatgaactttctcgcagtttttttaaagattatgtcgtt
cctggttttgacattgctaaggaattgctcttagtgtacatgaagtataaagggattaag
gaaaaatttccaaagacataa
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