Clarias gariepinus (North African catfish): 128512847
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Entry
128512847 CDS
T10780
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128512847
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Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
Motif
Other DBs
NCBI-GeneID:
128512847
NCBI-ProteinID:
XP_053342277
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Position
25:12137551..12156715
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AA seq
623 aa
AA seq
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MFKAMEAPVCLIGSDSEGQLCVMKEAKEILDEITQPVVVVSVVGLYRTGKSYLMNRLAGK
QTGFALGSTIESKTKGIWMWCVPHPKKTGHTLVLLDTEGLGDVHKGDEKHDTWIFCLAVL
LSSTLVYNSLGVIDNNALEKLHYVTELTENIRVKAQTGGEHDHSADFMRVFPSFIWAVRD
FTLRLEKNDKAITANEYLESALELKIGSSSKIEKFNLPRRCLRSFFAERQCFVFPRPATD
ADLARMEELSETDLNGWFLHCAEDFCSYVFSNAKPKTLTGGRMLAGSALCNLAEVYVGAI
RSGQIPCLENAVETLSQIQNERAVEQGLQVYQSQVLELVCFPIDPSKLSDIHRIAETAAV
EVFISICFNDTEQKAQLRLMKEIQTVYQDFCGQNNEECLNVCTLELKRVFADLDERMNDG
SFMHPGGYKEYCSELQRLANEYRARTHKQSMSEKVLTEHLKEREQLGRNILLADQCLTEA
EQVTEVERLKKDALEQRNKSLEEMKTLQEQVFKDQQRTYEQHMTHLLDRMEKEMERARED
NTRVLEAKLKEQKALLEEGFEERAELMNKEIQSLKGEMEDDDKTKQTTLSKVVDAVGLAA
TLFLPGLIPKAAGMAASFLSRYL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaagccatggaggcaccagtatgtctgattggcagcgattctgaaggacagcta
tgtgttatgaaagaagctaaagagatattggatgaaatcactcagccagttgttgtagtg
tctgtggtggggctctaccgtacggggaagtcttacctcatgaaccgtctcgcagggaag
caaacaggctttgctctgggcagcacaatagagtcaaaaactaaaggcatttggatgtgg
tgtgttccacacccaaagaaaacaggacatactctggtgctgctggacactgagggactc
ggggatgtacacaagggtgatgaaaagcatgacacatggatcttctgtctggctgttctg
ctcagtagcactctggtctacaacagccttggggtcatagacaacaatgcacttgaaaag
ctacattatgtgacagaactgactgagaacatccgggtgaaagcacagacaggtggtgaa
catgatcactcagcagacttcatgcgagtcttcccctccttcatctgggctgtgagagac
ttcactctcaggttggagaagaatgacaaggccatcacagctaatgaatacctggaaagt
gctttggagcttaaaattggttcttccagtaaaatcgagaagttcaacctgcccagacgc
tgtttgcgtagttttttcgcggaacggcagtgttttgtattcccacggccagctacagat
gctgacctggcaagaatggaggagctgtctgagacggatcttaatggatggtttttgcat
tgtgctgaggacttctgcagctatgtgtttagcaatgccaaaccaaaaaccttaacaggg
ggtcggatgctcgctggcagtgctctttgcaatctggcagaggtgtatgtgggggcaatt
cgtagtggtcaaattccctgtctggaaaatgcagtggagactttgtcccagatccagaat
gagcgggctgtggaacaggggctgcaggtctaccagagtcaggttcttgaattagtgtgc
tttccaattgacccatccaagctatcagacatccacagaatagcagagacagcagctgtc
gaagtgtttatcagcatttgctttaatgacacagagcaaaaagcacagctgaggctcatg
aaagagatccagactgtgtatcaggacttctgtggtcagaacaatgaggagtgtttaaat
gtgtgtacgctggagttaaagagggtgtttgctgatctggatgagcgtatgaatgacggc
tcatttatgcacccaggaggatataaagagtactgcagtgaactccagaggctcgcaaat
gaatatagagcacgcacacacaaacagtcgatgagtgagaaagtgttgaccgagcatctg
aaggagagggaacagttagggaggaatattcttttagctgatcagtgcctcactgaagca
gagcaagtcacggaagtggagcgtttgaaaaaggatgctttagagcagaggaacaaatct
ttagaggagatgaaaacccttcaggagcaggtgtttaaggaccagcagaggacgtatgaa
cagcacatgacccatttgctcgaccgcatggagaaagagatggagagagcaagggaggat
aacacacgagtgctggaagctaaacttaaggaacagaaggctctgttggaggaagggttt
gaggaaagagctgagctgatgaataaagagattcaaagtttgaaaggagagatggaagat
gatgataaaacaaagcagactacacttagtaaggtagtggacgctgtgggcctggcagca
actctgttcctacctggactcatccctaaagctgccggtatggctgcatcattcctgtca
cgatatctttga
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