Clarias gariepinus (North African catfish): 128512848
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Entry
128512848 CDS
T10780
Name
(RefSeq) receptor-type tyrosine-protein phosphatase S-like isoform X1
KO
K06778
receptor-type tyrosine-protein phosphatase S [EC:
3.1.3.48
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128512848
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgar01009
]
128512848
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgar04515
]
128512848
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
128512848
Protein phosphatases and associated proteins [BR:
cgar01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
128512848
Cell adhesion molecules [BR:
cgar04515
]
Immunoglobulin superfamily
Type II RPTP family
128512848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
Pur_ac_phosph_N
Tc-R-P
PTP-SAK
DSPc
fn3_2
PTPlike_phytase
Y_phosphatase3
PTP-NADK
Fn3_PTPRU
V-set
C2-set_3
DUF5849
Motif
Other DBs
NCBI-GeneID:
128512848
NCBI-ProteinID:
XP_053342279
LinkDB
All DBs
Position
25:16626327..16770913
Genome browser
AA seq
1552 aa
AA seq
DB search
MARGSVELFPSTVLFLLAVLLSTLSSTCHALSSPKFTKIPTDQIGVSGGVVSFVCQATGD
PKPQVVWNKKGKKVNSQRIETIEFDEGAGAVLRIQPLRAPRDENVYECVARNSEGEIAVT
SKLSIIREDLLPFGFPSIDMGPQLKVVERTRTATMLCAASGIPDPEISWFKDFLPVEPAL
SQGRIKQLRSGALQIERTEETDQGKYECVASNSQGVRYSSPANLYVRVRRVPPRFTILPS
SHEIMPGGSVNITCVAVGSPMPYVKWMLNSEDLTPEDEMPVGRNVLELNGVRESANYTCV
AMSSLGIIEAVAQVIVKSLPRAPGTPIVTETTATSITITWDSGNPDPVSYYIIQYRAKSP
DSKFETVDSITTTRYSIGGLYPNTEYEIRVSAFNTIGQGPPSNKVEARTGEQAPASPPRN
VQAQIISPSAVTVRWEEPEEPNGQIKGYRVYYTMDPSQPMSNWKIHNVQDSVITTIQSLA
PSETYTIRVLAFTSVGDGPFSDSVHVKVLPGVPGQPGKFRVGKVRDTSIELMWDPPFSKE
PIKSYELIYRAAKHGAQEKKSFEPKSSYVVEGLRANTEYTFSLAAISSKGIGAFTNEIFH
RTAQARSTLGTARGPWEPSYPLFPPLLLDASGLWKSRKNPGTNAIKTRETIDAIHKRVGG
RYVPRNFSVNLATKTSVLLTWEFPESSSPYRFTVEYNRQKMEVDARLRKAVIPNLMPDTS
YDFKITSPEGNLGGLRHRIHAKTSPPMVINRPEIDHSRDTETTITIILPSLDTRNNVRNI
YVVVVPLKRGRGGNRHLKSPDEMDLEELLKDISQKQHDPRQRQVDLRRAYITARFTPSTL
PAFFTLGDQLDYGGFDNRALESGQEYVFFILAELNSTTGKMFVASPYTDPVIAPDSDPQP
LDAGDGLIWVVGPVLAVVFIICIVIAILLYKNKRKDSEPGTKCLLNNAEMMAHHPTDPVE
MRRINFQTPGMMSHPPIPISELAEHTELLKANDNLRLSQEYESIDPGQQFTWEHSNLEVN
KPKNRYANVIAYDHTRVILAPVNGIIGSDYINANYIDGYRKQNAYIATQGPLPETFGDFW
RMVWEQRAASIVMMTKLEEKSRIKCDQYWPSRGTETYGLVQVTLLDTMELATFCVRTLSL
HKGGCNERREVRQFQFTAWPDHGVPEYPTPFLAFLRRVKACNPPDAGPIIVHCSAGVGRT
GCFIVIDAMLERIRHERTVDIYGHVTLMRSQRNYMVQTEDQYSFIHEALLEAVTCGNTEV
AARSLYSYMQKLAQVESGEHVTGRALEFKRLANTKAHTSRFVTANLPCNKFKNRLVNIMP
YETTRVCLQPIRGLDGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIV
VMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTV
RQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIV
LERMRYEGAVDIFQTVKMLRTQRPAMVQTEDEYQFCYQAALEYLGSFDHYAT
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtggctcggtggagctgtttccctctaccgtcttgttcctgctggccgtcttg
ctctcaacgctgtccagcacttgccatgccttatcttcccccaagttcacaaagatcccg
acagatcagataggagtgtccggtggtgtggtgtctttcgtgtgtcaagctacaggcgac
ccgaagccacaggtcgtctggaacaaaaagggcaaaaaggtcaactcccagaggatagag
accatcgagtttgatgaaggagcaggggcggtgcttcgtatccagccactgcgagcgccg
cgagatgagaatgtttacgaatgtgtggcccggaacagtgagggcgaaatcgcagtcacc
tccaagctgtccattatcagagaggacctgctgccatttggcttccccagtatagacatg
ggtccccagctgaaggtggtggagcggacgcgcacagccaccatgctctgcgctgccagt
ggcatccccgatccagagatctcctggttcaaggactttcttcccgtggagccggcgctc
agccagggccgaattaaacagcttcgatcaggtgccttgcagattgagcggaccgaggag
acagaccaggggaaatatgagtgtgtagcgtcaaactcgcaaggagtgcgctactcctcc
ccggccaatctttatgtgagagttcgccgagttccgcctcgtttcaccatcctgccctcg
agtcacgagatcatgccaggaggaagtgtaaatatcacatgtgtagcagtgggttccccc
atgccctacgtgaaatggatgctgaactctgaagaccttacgcccgaagacgagatgccg
gtcggccggaatgttctggagctgaacggcgtccgtgagtcagccaactacacctgcgtg
gccatgagcagcctggggattatagaagctgtggctcaggtcatcgttaaatcattaccc
agagcccccgggacccccattgtgacagagacaactgccacaagcatcaccatcacctgg
gactctggaaaccctgaccccgtgtcctattatatcatccagtaccgagcaaaatcaccc
gatagcaagttcgagacggtggacagcatcacgacaacacgctacagtattggtggcctc
taccccaacactgagtacgagatccgtgtctctgcgtttaacaccattggtcaaggcccg
cccagcaacaaggtggaggctaggaccggggagcaggcacctgccagcccgcctcggaat
gtccaggctcaaataatctcacccagtgcagtgactgtcaggtgggaggagcctgaagaa
cccaatggccagataaagggctatcgagtttactacaccatggatccctcgcagccaatg
agcaactggaagatccataatgttcaggatagtgtgatcaccaccatccagagcctggct
ccatcagagacctataccatccgtgtgcttgcttttacttctgtaggagatggacccttc
tctgactcggtgcacgttaaagtgcttcctggggtcccaggccagccggggaagttccgg
gtgggcaaagtgagagatacgagcatcgagctgatgtgggatccgcctttctccaaagag
cccatcaagagctatgagctcatttacagagctgccaagcatggtgcacaggagaagaaa
agcttcgagcccaagtcctcgtatgttgttgagggtctgcgagcaaacaccgagtacacc
ttctctctggcggccatttccagcaaaggcattggcgccttcaccaacgagatcttccac
cgcactgcgcaagccaggagcactctgggtactgcaaggggaccatgggaaccttcctac
ccattgtttcctccacttctcttggatgcttctggattatggaaaagcaggaaaaatcca
ggcaccaatgcgataaagacacgggaaaccattgatgccatccacaagcgcgttggtgga
cgatatgttcccaggaacttctctgtgaatctggcgaccaagacaagtgtgttgctaacg
tgggagtttcccgaaagcagctccccctatcgatttactgtggagtacaaccgtcaaaag
atggaggtggatgctcgcttgaggaaggctgtgatcccgaacctgatgcctgacaccagc
tacgatttcaaaatcaccagtcctgagggcaacctgggaggcctgagacaccgcatccat
gccaaaacctcacctcccatggtcatcaatcggccagagatcgaccacagtcgtgacact
gagaccaccatcacaatcatactgccatcactggataccaggaacaatgttaggaatatc
tatgtggtggtggttcctctgaagagaggccgaggagggaaccggcatctaaagagccca
gatgaaatggatttggaagagctgttgaaggacattagccagaagcagcatgacccacgg
cagaggcaagtggaccttcgtcgtgcgtacatcaccgctcgcttcactccctccaccctg
cctgcgttcttcacacttggggaccagctggactacggtggttttgataaccgtgctctg
gaatccggccaggagtacgtcttctttatcctcgctgaactcaattccaccactgggaag
atgttcgttgccagcccctacacggacccggttattgcacctgactcagacccccagcct
ctggatgctggagatggactcatctgggtggtgggacccgtcctagctgttgtcttcatc
atctgcatcgtcatcgctatcctgctgtacaagaacaagcgcaaagactccgagcctggc
accaagtgtttactgaacaacgctgaaatgatggctcatcaccccaccgaccccgtcgag
atgagacgcatcaacttccagacgccaggtatgatgagtcacccccctattcccatctcc
gagctggcagaacacaccgagcttctgaaggccaacgacaacctccggctctcccaggag
tacgagtctattgatcccgggcagcagttcacatgggagcactcgaacctggaagtgaac
aaaccaaagaaccgctacgctaacgtcatcgcctatgatcacaccagagtcatcctcgca
ccagtgaatggcattatcggtagtgactacatcaatgcaaactacatcgatggctacagg
aagcagaacgcgtacatcgcaacacagggcccgctgcctgaaacgttcggagacttctgg
aggatggtgtgggagcagagagctgcgtcgatagtgatgatgactaaactggaggagaaa
tcacggataaagtgcgatcagtattggcccagcagaggaacggaaacttatggcctggtg
caggtgacacttctggacaccatggagctcgcaacattctgtgtccggacactctcactg
cacaagggtggctgtaatgagaggagggaggtgcgacagttccagttcacggcatggcct
gatcatggtgttcccgagtatcctactccattcttggctttccttcgcagagttaaggcc
tgtaatcctccagatgcagggcctattatcgttcactgcagtgctggcgtgggacgtaca
ggctgcttcatcgtgatcgatgccatgcttgagcgtatccgtcacgagcgcacagtggac
atctatggtcacgtgacgctgatgcgttctcagaggaattacatggtgcagacggaggat
cagtacagcttcatccatgaggccctgctagaggctgtcacctgtggcaacaccgaggtg
gcagcacgcagcctctactcctacatgcagaaactggcacaggtggagagtggcgagcat
gtcacaggcagggcactggaattcaagcgcctggcgaacactaaagctcacacgtccagg
tttgtgacggctaacttgccctgcaacaagttcaagaacaggctggtgaacatcatgccg
tatgagaccacccgtgtgtgcctgcagccaatcagaggcctcgatggctccgactatatc
aacgccagctttattgatggatacaggcaacagaaggcgtacatcgccacacaaggtcct
ttagcagagaccacagaggatttctggaggatgctgtgggagcacaactccaccatcgtg
gtcatgcttaccaaattaagagaaatggggagggaaaaatgtcaccagtactggcctgcc
gaacgctctgcccgctaccagtactttgttgtggaccccatggccgagtacaacatgcct
cagtatatcctgagagagttcaaagttacagatgcaagagatggacagtcacggacagtc
aggcagttccagttcacggactggcctgaacagggagtgccaaaatcaggagagggcttc
atcgattttatcgggcaggtgcacaaaaccaaggagcagttcgggcaggacgggccaatc
actgtccactgcagtgcgggcgtggggaggacaggtgtgttcatcactcttagtattgta
ctggaaaggatgcgttacgagggagctgtggacatcttccaaacagtcaaaatgctgcgc
acacaacgaccagccatggtgcagacggaggatgaataccagttctgttaccaggccgcg
ctcgagtacctgggaagcttcgatcactatgcaacataa
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