Clarias gariepinus (North African catfish): 128512854
Help
Entry
128512854 CDS
T10780
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128512854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
128512854
NCBI-ProteinID:
XP_053342295
LinkDB
All DBs
Position
25:13610561..13630122
Genome browser
AA seq
626 aa
AA seq
DB search
MCSPMSEPICLVENVDGSLCVNAGAVEHLSKYDQPVVVVSVVGFYRTGKSYLLNRLAGKQ
TGFALGSTIESKTKGIWMWCVPHPYNAGQTLVLLDTEGLGDVDKGDSKNDAWIFCLAVLL
SSTLVYNSRGTIDNTAVEKLHYVTELAEQIRIKSPSSRAAEEEDEEDFTFVQFFPNFIWA
VRDFSLELELEKRGQVTEDEYLDFALQLKKGLSMKNTNYNLPRQCIRNYFPTRKCFVFPF
PASQEKMVCLESLDESEIVPKFLAATKQFRDYVFAASKVKTLKGGYRVTGRIFGHLVQSY
VETISSGKVPCLENAVVVMAQIENQTALEEGLEVYQSGMEQVKSLFPVNLNTLSAEHQKM
SNVASTEFMKRSFKDEGQEYFNKLMEAVDKHYAELITQNMEASDKKCQLILSDLYEKMNE
GVQRGEYAKPGGYKLYCTHRDNVITQYNSHPDKGNQADAVLERFMSEKSVEAKIILQTDE
QLTECEKKVQEEKEQAAVLEQQCKAEQKRNLELEQLMQEEKANHKQRMQQLEMKFEEERL
QQQQELDRAVESKMAEQNELLTKGFLEKAQVLELEIEQLKKEKDKQSDNFFKNYIMPIVD
IARDVFSIVLQYELMKKTYSKASIKE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagcccaatgtcagaacctatttgtttggtggaaaatgtggatggttccctgtgt
gtaaatgctggtgcagtagagcacctgtccaagtatgaccagccagtggtggtggtgtct
gtggtgggattctatcgcacaggaaagtcctacctcttgaaccgcttggcaggcaaacaa
acaggctttgctctgggcagcaccattgagtcgaagactaaaggtatttggatgtggtgt
gtcccgcacccctataatgctggacaaactcttgtgctgctggacactgagggactgggg
gatgttgacaagggagactcgaaaaatgatgcctggatcttttgtctagctgttcttctg
agcagcactctagtctacaacagccgtggaaccatcgacaacacagcagtggaaaaacta
cactatgtcactgagcttgcagagcagattaggatcaaatcaccttcatccagagcagct
gaggaagaggatgaagaagactttacatttgtgcagttttttcctaactttatctgggca
gtgcgtgatttttctttggagctagagcttgagaaaaggggccaagtgactgaggatgag
tacctggattttgccctccagctgaagaaaggtcttagtatgaaaaacaccaactacaat
cttccaaggcaatgcattcgaaactattttccaaccaggaagtgctttgttttcccgttt
cctgcctcccaggaaaaaatggtttgtttagagagcctggatgagagtgaaattgttccc
aaatttttggctgccacaaagcaattccgtgactacgtctttgctgcaagcaaagttaaa
acacttaaaggaggatacagagttacaggaagaatctttggtcacctcgtgcagtcatat
gtggagacaatttctagtggaaaagtcccttgtctggagaacgctgtggttgtaatggca
cagattgaaaaccagacagctttggaggagggacttgaggtctatcagagtggaatggaa
caggtgaaaagtttgttcccagtcaatttgaacacattatctgctgaacaccagaagatg
agcaacgtggccagcactgagtttatgaagcgctcttttaaggatgaaggccaggaatac
ttcaacaaactgatggaggcagtagataagcactatgctgagctaattactcagaacatg
gaggcatcagataagaagtgccagctgattctgtctgatctatatgagaagatgaatgag
ggagtgcagcggggggagtatgcaaagcctggaggatataagctctattgcacacacaga
gacaatgtcattacccagtacaacagtcatcctgacaagggaaaccaggctgatgcggta
ttggagaggtttatgagtgagaaaagtgtggaggcaaaaataattctccagactgatgaa
caactgactgaatgtgagaaaaaggttcaggaagagaaagagcaagcagcagtgttggaa
cagcagtgtaaagcagaacagaaaagaaatctggaactggaacagttaatgcaggaggaa
aaagcgaaccataagcaaaggatgcaacagctggagatgaagtttgaggaggagaggctt
cagcagcagcaggagctagacagagcggtggaaagcaaaatggctgaacaaaatgaacta
ctaacaaaagggtttctagagaaagcccaggtgctagagcttgaaattgagcagcttaaa
aaagaaaaggataaacagtctgacaatttttttaaaaattacatcatgccgatcgtagac
attgccagagatgtgttttccatagtgcttcagtacgaactcatgaaaaaaacttatagt
aaagcttccataaaagagtaa
DBGET
integrated database retrieval system
