Clarias gariepinus (North African catfish): 128512856
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Entry
128512856 CDS
T10780
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128512856
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Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
128512856
NCBI-ProteinID:
XP_053342302
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Position
25:13778915..13801951
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AA seq
617 aa
AA seq
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MEKPECLISTDSEGRLYVVKEAQKILERISQPVVVVSIVGLYRTGKSYLMNHLAGQQTGF
ALGSTIESTTKGIWMWCVPHPTNPGYTLVLLDTEGLGDVDKGDEKHDTWMFCLAVLLSST
LVYNSLGVIDNNALEKLHYVTELTEHIQVKAQTGDDHDNSAEFMRYFPSFIWAVRDFMLK
LEKEGKAITANEYLELALKFKSGVSASVDKFNLPRRYLRSFFAERRCFVFPRPTRDDDDL
IRMEELTENDLNPRFLKHTKEFCSYVFSNAKPKTLARGQTLTGSALGSLAEIYVEAIRSG
EVPCLESAVETLAKIQNERAIEQGLQVYHDVLEAIRLPVDPSELSNNHSKAETAAIKVFI
STSFNDTEHNAQQKLNEEIQTLYQNRCNQNKEEWSNVCKRELNQVFSQLEAAMKNGSFMR
PGGYTEYRNKLQSCTNDYKARTSKTFMSEEVLSKYLRDNEQFEKNILLADQCLNAAEQKK
EAERLQKEALQRANNMLVNTTRLHEQERREQQRTYEKNVTQLLERMDKERQRAKEDNERV
MEAKLREQKFLLEGGFQQRADDMNKQINSLKGEMMNSEAILTQYKEIANNMNKQIQSLRG
EISSISSKSNQSSCLIL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggagaagccggaatgtctgataagcactgattctgaaggacgtctgtatgttgtgaag
gaagcccagaaaatactggagaggatttctcagccagttgttgtggtatctatagtgggt
ctctaccgcacagggaagtcttacctcatgaaccatctagcaggacaacaaacaggcttt
gctctgggcagcaccatagaatcaacaactaaaggcatctggatgtggtgtgtcccacac
cccactaacccaggatacacactggttctactggacactgagggcctcggggatgtggac
aagggtgatgaaaagcatgacacatggatgttctgcctggctgtcctgctaagtagcact
ctggtctacaacagccttggagtcatagacaacaatgcactcgagaagctacactatgtg
acagaactgactgagcacatccaggtgaaagcacagacaggtgatgaccatgataactca
gcagagttcatgagatattttccctccttcatctgggctgtgcgagactttatgctgaag
ctggagaaggaaggcaaggccatcacagctaatgaatatttggaacttgctttgaagttt
aaaagtggtgtttctgccagtgttgataagttcaacctgcccaggcgctatttgcgtagc
ttttttgcagaacgaaggtgttttgtattcccacgtccaactagagatgatgatgaccta
ataagaatggaggagctaactgagaatgacctcaacccacgatttctaaagcacactaag
gagttctgcagctatgtgtttagcaatgcaaaaccaaaaaccttagcaagaggacagacg
ctcactggcagtgctcttgggagtctggcagagatctatgtggaggcaattcgtagtggt
gaggttccttgtctggagagtgcagtggagactttagctaaaatccagaatgagcgggcc
atcgaacagggcctgcaggtctaccatgatgttttggaggcaatccgccttccagtagac
ccatctgaactatcgaacaaccacagcaaagcagaaacagcagctatcaaagtcttcatc
agcacttcctttaatgacactgagcacaatgcacagcagaagctcaatgaagagatccag
actttgtatcagaatcggtgtaatcagaataaggaggagtggtcaaatgtttgtaagagg
gaactcaaccaggtgtttagccagttggaggcagcaatgaaaaatggttcatttatgcgg
cctggtggctacacagagtatcgcaataaactgcagagctgcacaaatgactacaaggca
cgcacaagcaaaacattcatgagtgaggaagtgttaagtaagtatttgagggataatgaa
cagtttgagaagaatattcttttagctgatcagtgcctcaatgcagcagaacagaaaaaa
gaagcggagcgtttgcaaaaggaggctctacaacgggcgaataacatgttagtgaataca
acaaggcttcatgagcaggaacgccgcgaacagcaaaggacctatgagaagaatgtgacc
cagctgctggaacggatggataaagaaaggcagcgagcaaaagaggataatgaacgagtg
atggaggctaagcttagagagcagaagtttctgttggaaggtggatttcagcaaagagct
gatgacatgaataaacaaattaacagtttgaaaggagagatgatgaattctgaagcaatt
ctgacacagtataaggaaatagctaataacatgaataaacagattcaaagtttgagagga
gagataagtagtataagttccaaatcaaatcagtcgtcatgtctcattctttaa
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