Clarias gariepinus (North African catfish): 128512862
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Entry
128512862 CDS
T10780
Name
(RefSeq) serine/arginine-rich splicing factor 7-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03040
Spliceosome
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128512862
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128512862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128512862
Spliceosome [BR:
cgar03041
]
Common components
Common spliceosomal components
SR proteins
128512862
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
zf-CCHC_3
zf-CCHC
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
128512862
NCBI-ProteinID:
XP_053342309
LinkDB
All DBs
Position
25:9180468..9187700
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AA seq
239 aa
AA seq
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MSYYSSSSSRSSSRNLECKVYVGDLGGGAAKGEIERAFSYYGPLRSVWVARNPPGFAFVE
YEDARDAEDAVKGMDGKLLGGSRIRVELSTGMSRKSRYGRASRRPFDPNDRCYQCGDRGH
YAYDCYRFSKRGRRSRSRSRSRSRSRSRRNRSRSRSRSHNRRYRSPSYSKRRSRSGTPAR
SKSRTPVRSRSRSRSGSASRSRSRSRSRSRSLKRRSHSRSPSPKKSPKSTDGEQVEKNH
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtcatactactcatcatcatcatctcgcagttcctccagaaacttggagtgtaaggtt
tatgtgggagatttaggaggaggagctgctaaaggagaaattgaaagggcttttagttac
tacggccctttgcgcagtgtttgggtggccaggaaccctcctggatttgcttttgtggaa
tatgaagatgctcgggatgctgaggatgcagtgaaaggaatggatggaaagctgctcggg
ggatctcggattcgcgtggagctgtccactggcatgtctagaaaaagccgatatggccgt
gccagtcgccgtccatttgatccaaatgatagatgctatcagtgtggagacaggggacac
tacgcctacgactgctaccgcttcagcaagcgagggcgtcgaagcaggtccaggtctaga
tctcgctccaggtcaaggagtcgccgcaaccgttcacgatctcgaagccgcagccataac
cggaggtaccgttctccatcttactcaaaacgcaggagcaggtctggcactccagctcgc
tccaaatctaggactcctgttcggagtcggtctcgctcccgatctggatctgcctcgcgc
tctcgctcaagatccaggtcccgctctcgcagcctcaagaggcgtagccattccaggtcc
cccagcccgaaaaaaagccccaagtccactgacggagagcaagtggagaagaaccactaa
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