Clarias gariepinus (North African catfish): 128512878
Help
Entry
128512878 CDS
T10780
Symbol
zgc:110269
Name
(RefSeq) probable flap endonuclease 1 homolog
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03030
DNA replication
cgar03410
Base excision repair
cgar03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128512878 (zgc:110269)
03410 Base excision repair
128512878 (zgc:110269)
03450 Non-homologous end-joining
128512878 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgar03032
]
128512878 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128512878 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128512878 (zgc:110269)
DNA replication proteins [BR:
cgar03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
128512878 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
128512878 (zgc:110269)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
128512878 (zgc:110269)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128512878 (zgc:110269)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
128512878
NCBI-ProteinID:
XP_053342338
LinkDB
All DBs
Position
25:complement(25128806..25135808)
Genome browser
AA seq
344 aa
AA seq
DB search
MGIMKLADLIRADAPESITHKQLGDYSGKIIAFDTSIIMNQFRCAVPNQTISLLGVFYRT
LTFLEHGIKPVFVFDGVPPDEKLAVLEKRAQNAGWGSYQRSPTVSSKTQDFLRLLPLLGV
PCVQAPSEAEACCAQLVRSGVVDAVASEDMDTLAFGGVLLLRQLNANSGSDVTEYSLPKL
LEILQLSQEEFVDLCILLGCDFCDKIMGLGPTRALKLIQQHRTIEGVMLNINRKTHPVPE
EWQYEAARRLFLNPPPVEPPCLQWTEPNEEELVKFLCQEKRAKEERVRGRIQTFRQNQAY
KREKEEKKEGDTNQASMNDFYPVTRKRWSAEAGGSRATKQPKAN
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggggatcatgaaattagcagatctgattcgcgctgacgctccagagtcgatcactcac
aaacagctcggagattacagcggcaaaataattgcatttgacacctccattattatgaac
cagttccgttgtgctgttcctaatcagacaataagcttgttaggtgtgttctaccgcaca
ctgacgttcctggagcacggcatcaagccagtgtttgtgttcgatggagttcctcctgat
gagaagctggccgtgctggagaaaagagcacagaatgcaggatggggaagctatcagcgc
tctcccaccgtgtcctctaaaacacaggacttcctgcgtctcctcccgctcctgggtgtc
ccctgtgtccaggcccccagtgaggctgaggcatgctgtgcccagctggtcaggagcggt
gtggtggacgccgtggcgtcggaggacatggacacgctggcgttcggaggggtgcttctc
ctccgccagctgaacgctaacagcgggagcgatgtgacggagtactctctgcccaagctc
ctggagatcctgcagctctcacaggaagagtttgtggatctgtgtatcctactgggatgt
gatttttgtgataagatcatgggtttggggccgacccgagcactcaagctcatccagcag
caccgcaccatagagggcgtcatgctcaacatcaacaggaagactcacccagtccctgaa
gagtggcagtacgaggctgcgcgccggctgttcctgaacccgcccccggttgagccgccc
tgtctccagtggacagagccgaatgaggaggagctggtcaagttcctgtgccaggagaaa
cgcgccaaagaggagagggtgcgaggacgtattcagacgttccggcagaatcaggcctac
aagcgggagaaagaggagaagaaggagggagacaccaatcaggccagcatgaacgatttc
taccctgtgacacggaaaagatggtctgcagaagcaggaggatccagagccacgaagcag
ccgaaggcgaactga
DBGET
integrated database retrieval system
