Clarias gariepinus (North African catfish): 128512898
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Entry
128512898 CDS
T10780
Symbol
gigyf2
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128512898 (gigyf2)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128512898 (gigyf2)
Surveillance factors
Other surveillance factors
128512898 (gigyf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
128512898
NCBI-ProteinID:
XP_053342370
LinkDB
All DBs
Position
25:13982621..14030189
Genome browser
AA seq
1335 aa
AA seq
DB search
MAETQTLNFGPEWLRALSGGGGSSSVASPPLSPALPKYKLADYRYGREEMLALYVKDNKI
PVDLHDKEFLPILQEEPLPPLALVSFTEEEQRNFSMSVNSAAVLRLTGRGGGVVAGAPRG
RSSSRGRGRGRGEGGFYQRSFDDVEGGFGRGGREMHRSQSWEERGDRRFEKPSRKDPDGT
PAHFQLNHLRANYEDGGTGLVRKHDFTRSESENWRMSRDEQNGEDEEGGGWRLAGSRREN
ERWCPPSPDGPRLAGGWREQPDQRRRLPLDSRGEEERVGGYRRARTASGSMEDERDALPE
WCLEDAEEETGTFDSSGAFLPLKKAPAEPILEEAELEFRPLEEGEECCEKDENEAGHPKE
PDSKCQPVRNEDTGKSEEASPPDALLPPAPEPAVSIPLPSSQSERVEEPERAAPLEIRAP
AAAPLHSALPISVPHSTNALSTLTDLPASSHPVLPTQQIASHPKPVEVPVVVPDALPFPK
NIMSHIGQMAAVATDVDEDEGLKHFEQEAEKMVAYLHDGGGDDERLGTKNAERPKVGCLP
PSHEAALKWYYKDPQGEIQGPFNNHEMSEWFQAGYFAMTLLVKRGCDEGFHPLGEIFKMW
GRVPFAPGPPLPPILGDADQERIKRQQELNALSIYQLQQLQYQYILRQQQYAQALAQQKA
VLTSAPPPTQQQQQINLFLQQALKLRTPEQQQSLLPPVTRSMSVPDSGSIWDIQNPSTQA
SCAANIQPAAPSTWEGTSVWDLPIDTLPQPSIEQIQLEKAKAAKMEMELRVKREEEERKR
LEEVLRVQQEEERKRLEEEELARRKQEEALRRQREQEESQRRQKEEEERLAREEELRRLE
EKRREEEERKQREEFLRKQEEERRKQEELEAQRRREEEAAALARQQQEEQKRKEQELQRQ
QELQRQQEVQRQQEIQRQKELLRQQELQRQQEAQRQQEAQRQQELQRQRQQQQEALRRLQ
QQQQQQQLAQMKLPSSSKWGQQSASSSSLSQTQSTLSFSEIQKLEEERERLTREEQRRQQ
QELQRQQQQQQQQQQQQPQTKLSGWGSMAKQPAATKSLLEIQQEEAQQMKQKKEQQQTAV
VQQNRTQNRVALTSSVWGAVSNTGHWGSDSNSIWGDTQNSNLGFWDDAVKETAPPPTTRK
NNPPKNKGNVNLSNSNGGKSSKKVEEEEKLLKLFQGANKTQDGFMQWCEQMLNTLNTANN
LDVPTFASFLKEVDSPYEVHDYVRAYLGDTPQAKDFAKQFLERRAKQNVNQQKSLPSQQP
KNQQDSVWGVNQTVTQPVFQSNNSTKQQPRFETVTSGKKKKKQKMVRADPSLLGFSVNAS
SERLNMGEIETVEDF
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacccagacacttaactttggaccagaatggctccgtgctttgtctggagga
ggtggaagcagcagtgtggcttctccaccactctcgcctgcattgccaaagtataaactt
gcagactatcgctatgggagagaggagatgctagcactttatgtaaaggataacaagatt
cctgtagatctacatgacaaggaatttctgcctattttacaagaggaacccctacccccg
ctggccctagtctcatttacagaggaagaacagaggaatttctccatgtcagtaaacagt
gcagcagtgctgcgcctgactggacgaggagggggtgtggtggcaggggcaccacgaggg
cgaagttcttcacgtgggcgcggtcgaggaaggggggaaggtggattttaccaaagaagt
tttgatgacgtggaaggtggttttggacgtgggggaagagagatgcatcgttctcagagc
tgggaggaaaggggagacagaagatttgaaaagccaagtcgaaaagatccagatggaact
ccagcccactttcagctcaatcacttgcgggcaaattacgaggacggtggtacaggcttg
gtgcgaaaacacgatttcacgcgctctgagagtgagaattggcgaatgtcgcgtgatgaa
cagaatggtgaggatgaggagggtggcggttggcgtctagcgggctcacgacgagagaat
gagagatggtgtccaccaagcccagatgggccacgtttggctggaggatggcgggaacag
ccagatcagcgacggcgattgccattggactcccgtggggaggaggagcgtgttgggggg
tacaggcgggcccgcacggccagtggcagtatggaggatgagagggacgcactgcctgag
tggtgtctggaggacgcagaagaggagacgggcacttttgactcatctggagctttcctc
ccgctcaagaaagctcctgcagagccgattcttgaagaggccgagctggagtttcggccg
ttggaggagggtgaagagtgctgcgagaaagatgaaaatgaagcaggacatcctaaagaa
cctgactccaagtgccaacctgttaggaatgaggacactggcaagtcagaagaggcttcc
ccaccagacgctctattaccacctgctccagagccagctgtgtccatacctctgccctcc
agtcagtcagagagggtggaggaacccgagagggcagcaccacttgaaattagagctcct
gctgcagctccgttacactcagctctccccatatctgtaccacacagcacaaatgcactc
agcacactaacagatcttccagcctcctcccacccagtgttgcccacccagcaaattgca
tcccatcccaagccagtggaggtgcctgtggtagtacctgatgcactccctttcccaaag
aacatcatgtcacacatcggtcaaatggcagctgtagcgacagatgtggatgaggacgag
ggccttaaacactttgaacaggaagccgagaaaatggtggcatatctacatgatggtggc
ggggatgacgagcgtttggggactaagaatgcagagcggcccaaagttggctgtctacct
ccatcccatgaggctgctctcaagtggtactacaaggatcctcagggagagattcagggt
ccctttaataatcacgagatgtctgagtggttccaggctgggtatttcgcaatgaccctg
ttggtgaaaagaggctgtgacgaaggcttccacccccttggagaaatctttaagatgtgg
gggagagtgccctttgctcctggccctccactaccacctatcctgggagatgctgatcag
gagaggataaagagacagcaggagctaaacgctctaagcatttatcagcttcagcaattg
cagtaccagtatatactcagacagcagcagtatgctcaggctctagctcagcaaaaagct
gtgcttacttcagcacctcctcctacacagcagcaacagcaaattaacctgtttttacag
caagctctcaagctcagaactccagaacagcagcagagccttttgcctccggtcacgcgt
tccatgtcagttccagattcagggtcaatctgggatatacagaatccatctactcaagca
tcctgtgcagctaacattcagccagcagctccaagcacatgggaaggcacaagcgtttgg
gatctgccaatagacaccttacctcaaccatcaattgaacagatacaactggagaaggct
aaagctgctaagatggagatggaacttcgagtcaaacgagaagaggaggagcggaagcgt
ctggaggaggtactgcgggtgcagcaggaagaggaacgcaaacgtctggaggaagaagag
ctggctcgaagaaagcaggaggaggcactaaggaggcaaagggaacaggaggagtcacag
cggcgccagaaggaggaagaagaacgtctggctcgggaggaggaactccgcaggctagag
gagaaaaggagagaagaggaagagagaaaacaaagggaagaatttctcagaaaacaggaa
gaagagcggaggaaacaggaggaactggaggctcagaggaggcgagaagaggaggctgca
gcattggctcgccaacagcaggaagagcagaagaggaaggagcaggaactccagaggcag
caggagctccaacgccaacaggaagttcagaggcagcaggaaatccaaaggcaaaaggag
ctgttaaggcagcaggaattgcagagacagcaagaggctcagaggcaacaagaagctcag
aggcagcaggagctgcagcgacagagacaacaacaacaagaggcccttcgaagactccag
caacagcagcagcaacaacagctggcccagatgaagctgccctcatcctctaagtgggga
cagcagtctgcctcgtcatcttccctcagccagacacagagcactctatctttcagtgag
atccagaagctagaagaggagagagaacgactaactagagaagagcagcgacgccagcag
caggagctccaaaggcagcagcagcagcaacagcagcagcagcaacagcaacctcaaact
aagctttcaggctggggcagcatggccaagcagcctgcagccactaaatcccttctcgag
atccagcaggaggaagctcagcagatgaagcagaagaaagagcagcagcagactgcagtt
gtacagcagaaccgcacacagaacagagttgctttgacctcttcagtgtggggtgcagtg
agtaataccggtcactggggatcagacagcaacagcatctggggtgacacgcagaactct
aacctaggcttctgggatgatgctgtgaaggaaaccgctccacctccaaccacacgaaaa
aacaacccaccaaaaaacaagggaaacgttaacctcagtaacagtaatggtgggaaatcc
agtaagaaggttgaagaggaggagaaactgttgaagctctttcagggggccaataaaact
caggatggctttatgcagtggtgtgagcaaatgctaaacacacttaacactgctaacaat
cttgatgtcccaacatttgcatcattcttgaaagaggtggactctccatatgaggtgcat
gattatgtacgagcatatctgggtgacacgcctcaggccaaggactttgccaagcagttc
ctggagcgccgtgccaaacagaatgtcaaccagcaaaaatcattgccgagtcaacagccg
aaaaatcagcaggactctgtgtggggggtaaaccagaccgttactcagcctgttttccaa
tccaacaactccacaaagcaacaaccacgctttgagacggtcacctctggaaagaagaag
aagaagcagaaaatggtgcgagcagatcccagtctattaggtttttcagtcaatgcgtca
tctgagcgattaaacatgggcgagatcgagactgtggaggacttttga
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