Clarias gariepinus (North African catfish): 128512931
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Entry
128512931 CDS
T10780
Symbol
gpc1b
Name
(RefSeq) glypican-1b
KO
K08107
glypican 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cgar00535
]
128512931 (gpc1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
128512931 (gpc1b)
Proteoglycans [BR:
cgar00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
128512931 (gpc1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
Others
128512931 (gpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
HrpB1_HrpK
Motif
Other DBs
NCBI-GeneID:
128512931
NCBI-ProteinID:
XP_053342437
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Position
25:complement(15218490..15314840)
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AA seq
544 aa
AA seq
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MDVRLALVLCVLAGAASADSASGKSRSCAAFRQFYSSKGFNLGVVPQAPISGEHLRVCPQ
GYTCCTSQIEENLSNLSKKEFEDQVKGSGHALQVSLNSQYKNFDGYFQELLNRSEVSLHD
SLQSSFGSLYSQNARVFQDLYLDLRIYYRGSKLNLEEALNDFWGKLLERLVRGLNGRYSM
GEDYLECVSKQAETLRPFGETVREFKLKVTRNFVAARSFVQGLVVAGEVVRKVSQVPLST
ECVRALMKQTYCPNCREMAWAKPCAPYCRNVMKGCLANQADLDTEWKNLADAMLQVADRL
SRPYSVDAAIMSLPKHIADAILHMQDNLNAFNSKVFQACGTPQENLSPEEPKKRGKTVAE
DVSSTSAADVEKLLSDISRKIRNMMQYWINLPNKLCVDREAKSGDENKCWNGMAIDRYLP
DVMGDGLANQINNPEVEIDITKPDMTIRQQIMQLKIMTSRIKNAINGNDVEFQDASDDVS
GSGSGMCNDDQCFHNQQIMVRSTGRPKVYPNPPVKKTEVKSDGRRLLPCYALYLLSLATA
LLRR
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgcgcctggcgctcgtgctgtgcgtcctggccggagcggcgagcgcagacagc
gcgagcgggaaatctcggagctgcgcggctttccgacagttctacagctccaagggcttc
aacctgggcgtcgttccgcaggctccgatctccggtgagcacttgcgagtgtgtccacaa
ggctacacctgctgtacgagccagatagaggagaatctgtccaacctgagcaaaaaagaa
tttgaggaccaggtgaaaggatctgggcatgccttacaggtctccctcaacagccagtac
aaaaactttgatggttatttccaggagcttctgaatcgttccgaagtttctctccatgac
tcattacagtcctcctttggttcgctctactcccagaatgcccgggttttccaggatctg
tacttagatctgcggatctactaccgtggctccaaactgaacttggaggaggcactgaac
gacttttggggaaagctgctggagaggttggtacgaggactgaatgggcgctacagcatg
ggcgaagattatctggaatgtgtgtcgaagcaggcggagacgctgcgtcccttcggtgag
acagtacgagagttcaagctcaaggttacacgcaactttgtggctgccaggtcgtttgtt
caggggctcgtcgttgctggggaggtggtgcggaaagtttctcaggttcctttgagtacg
gagtgtgtgcgtgctctgatgaagcagacatactgtcctaactgcagagaaatggcctgg
gctaaaccgtgcgccccatactgcaggaacgtgatgaagggctgtctggccaatcaggct
gacctggacactgagtggaaaaaccttgcagatgctatgctacaagtggctgatcggctg
agcagaccctacagtgtggatgctgccattatgtctctgcctaagcacattgccgatgcc
atccttcacatgcaggacaacctgaacgctttcaacagcaaggtgttccaggcatgcggt
acacctcaagaaaaccttagtccagaggagccgaaaaagagaggcaaaaccgtagcagag
gatgtcagcagcacttcggcagcagatgtggaaaaactgttatcagatatctcccgcaag
ataaggaacatgatgcaatactggattaatttgcccaataagctgtgcgtggaccgagag
gcaaaaagcggtgatgagaacaaatgctggaatggaatggccatagacaggtatctccca
gatgtaatgggagatggtctggccaaccagataaacaaccctgaagtggagattgacatc
accaaaccagacatgaccataagacaacagatcatgcagctcaaaatcatgacgagccga
ataaaaaacgccatcaacggcaatgacgtggaattccaggatgccagtgatgatgtcagt
ggctctgggagtggaatgtgcaacgatgatcagtgttttcacaaccagcagattatggtc
cgcagcacaggcaggccgaaagtctatcccaatccacctgtgaagaaaaccgaagtgaaa
agtgacggaagacggctcctcccttgctacgccctttacctgctctcactggccacagcg
ctgctcaggcgataa
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