Clarias gariepinus (North African catfish): 128512958
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Entry
128512958 CDS
T10780
Symbol
rars2
Name
(RefSeq) probable arginine--tRNA ligase, mitochondrial isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128512958 (rars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cgar01007
]
128512958 (rars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgar03016
]
128512958 (rars2)
03029 Mitochondrial biogenesis [BR:
cgar03029
]
128512958 (rars2)
Enzymes [BR:
cgar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
128512958 (rars2)
Amino acid related enzymes [BR:
cgar01007
]
Aminoacyl-tRNA synthetase
Class I (G)
128512958 (rars2)
Transfer RNA biogenesis [BR:
cgar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
128512958 (rars2)
Prokaryotic type
Other AARSs
128512958 (rars2)
Mitochondrial biogenesis [BR:
cgar03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
128512958 (rars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Cdc6_C
Sf6_terminase
Motif
Other DBs
NCBI-GeneID:
128512958
NCBI-ProteinID:
XP_053342488
LinkDB
All DBs
Position
2:51671960..51684443
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AA seq
578 aa
AA seq
DB search
MASFFRRSVSSQLVRVCGGSEELFIPLLSVPPVSKRQLTPDLQLSVSALLQSGVVSAGHD
LLGHTERLAAQLRADSVIEDVSAARGVITFRVNKLLLAQKVLSELSEDPQAFGVKSDLLR
ALPRGRTLVEYSSPNIAKKFHAGHLRSTIIGHFIANLKQALGIDVIRVNYLGDWGMQFGL
LGAGFQRLGSQDKLKENALQHLFEVYVQVNQEAELDESVRWDAAEFFRRLEQRDEQALLL
WKQFREITVQEYRRIYQRLGVHFDHYSGESFHQSKTQEVVTDLRTCGLLKTTEKGTGVVD
LSEQGDMSSYSTVVRSDGTSLYITRDIAAALERKQMFGFDEMIYVTDKSQSAHFRQLFRI
LGLMGHDWADRCVHVPFGLVKGMSTRRGDVVFLEDVIDEARNRMLHKMKQSKTTKVVCDP
ELTADQIGISALIIQDFKGPLIADYVFDWERVLQAQGDTGVFLQYTHARLRSLLRTQGDE
THTHFDASHLQDPRSISILQHLMRYDEVLLQSTLELQPRYLVTFLLTLCHLVSSAHRDLP
VKGSPTDVAQARLRLFAGSCSVLANGMKILGLTPVEKM
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtttcttcaggagaagtgtctcctcacagttagtgagggtgtgtggagggagt
gaggagctgttcatcccgctgctgtccgtcccgcccgtgtccaagagacagttgacccct
gacctccagttgagtgtgagtgcgctgctccagagtggagtcgtgtcagcgggacacgac
ctgctgggacacaccgagcgtctcgccgcgcagctgagagcggacagtgtgatagaggac
gtgagcgcggcccgaggagtcatcaccttcagggtcaacaaactgctgctggcacagaag
gttttgtcggagctcagtgaggatcctcaggcgttcggtgtgaagagtgaccttctgaga
gcactgcccagagggaggacgctggtggaatacagctctccaaacatcgccaagaaattc
cacgctggacacctcaggtccaccatcatcggtcacttcatcgctaacttgaagcaggct
ttgggaattgatgtcatccgcgttaattatttgggcgactggggcatgcagtttggcctg
ttgggggcggggtttcagcgtctgggctcccaggacaagctgaaggagaacgccctgcag
cacctgtttgaggtgtatgtccaggtgaatcaggaggcggagcttgacgagagtgttaga
tgggatgcggcggagttcttcagacgactggagcagcgtgacgagcaggcgctgttgcta
tggaaacagttcagagagatcacagtgcaggagtacaggaggatctatcagaggttgggt
gtacactttgatcattactcgggtgaatcgttccatcagagtaaaactcaggaggtggtt
actgacctgcggacatgcggcttgctgaagaccacagagaagggaacaggcgtggtggat
ctgagtgaacagggcgacatgtcgtcttactccactgtagtgcgcagtgacgggacctca
ctctacatcaccagggacattgctgcggctctggaacgcaaacagatgttcggctttgat
gagatgatctatgtgacagataagagtcagtctgcacacttccggcagctcttcaggatc
ctggggctgatgggacacgactgggctgacaggtgtgttcacgtgccgttcggtctggtg
aaggggatgagtacgcggcggggcgacgtggtgtttctggaggacgtgatcgacgaggca
cgaaacagaatgttacacaaaatgaaacagtccaagacaactaaagttgtgtgtgatcca
gagctgacagcagatcagataggaatcagcgctctcatcatccaggactttaaaggtccc
ctgatagcagactatgtgtttgattgggagcgagtgttacaggctcagggagacaccggg
gtctttctacagtacacacacgctcggctgcgcagtttgttgaggacacagggagacgag
acccacacacacttcgatgcgtctcacctgcaggacccgcggagcatttccatcctgcag
cacttaatgaggtacgatgaggttctgcttcagtcaacactcgagctacagccgcgctac
ctcgtcaccttcctgctcacgctgtgtcacctggtgtcctcagcacacagagacttacct
gtgaaaggaagccctacagatgtggctcaggccaggctccgcctcttcgccggctcatgc
tccgtcctggccaatgggatgaagatcctgggtctgaccccggtggagaaaatgtga
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