Clarias gariepinus (North African catfish): 128513007
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Entry
128513007 CDS
T10780
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128513007 (smc4)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
128513007 (smc4)
Condensin II
128513007 (smc4)
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
THOC7
Fez1
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
128513007
NCBI-ProteinID:
XP_053342564
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Position
25:complement(7056637..7081057)
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AA seq
1292 aa
AA seq
DB search
MPSKTTKSSSVAKPRGKGSQDDSEDEMKEIKPPREVQADDQDAPQTQDATGEEAVDNRAL
EEILGSIPPPPPPAMTNEPGAPRLMITHIVNRNFKSYAGEQILGPFHKRFSCIIGPNGSG
KSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDGHKEIQSCTVEVHFQKIIDKEGDDYDVI
PDSKFYVSRTAGKDNSSSYHINGKKATFKDVGTLLRSHGIDLDHNRFLILQGEVEQIAMM
KPKGQTEHDEGMLEYLEDIIGSCRLKEPINTLCRRVELLNEQRGEKLNRVKLVEKEKNAL
EGEKNKAVEFLTLENDMFKKRSQLCQFYVHDLQQRVTEKEAEKQEIQEDTKGLTEKSNQL
TEEMKGKNEALKNVEKKVGKLTKFIEGQKEKFTQLDLQDVEVREKLKHTKNKTKKLHKQL
QKDKEKLEEVKNVPSSSEKIITEASAQKEVLEKEKIKEEAALAHVMERLKEETSGLQQEK
EQNEKELLELSKAVNETRSKMDVAQSELDIYLSQHNIAVSQLNQAKEALQGTADTLRDRR
AAIKELKVKVPKCEQELKKDEEELKQISEQDGQVQATVRDMRQKVEEAKSSLSSTRSRGK
VLDALMQQKRSGKIPGILGRLGDLGAIDEKFDIAISSCCGALDNIVVDTIDTAQKCVTFL
KAQSIGVATFIGLDKMKVWEKNTKAISTPENIPRLFDMVKVKDECVRPAFYFALRDTLVA
KDLEQATRVAFQKDKRWRVVTLQGQIIEQAGTMTGGGGRVMKGRMGSSIGTEVTQEQLDK
MESALKEKVAQLQGWQQRKQQLEESVHKRRQELRDMKNTLEKYTASIQSLEEQEVHLKSQ
IKELEANVIAAAPDKAKQKQMEKNLEAFKKNYEAASNKAGKVEAEVKRLHNLILDINSHK
LKAQQDKLDKINKELDECSSAITKAQVAIKTSGRNLKKAEETVTRLETEIAENEKLMEEL
TEQLKKLEDQAGEIMKSCQEAEEALPEVQEQHRGVLQEIKALQEQEHTLQKDSLNVRLKV
EQIDTAIAECQNKIKHWEKESTKLTLHTIDDKPAEELPRLNTEQLEAIKSADIIKNEIAL
LEDRCAQMKPNLGAIAEFKKKEELYLQRVAELDEITNQRDNFKRSCEDLRKQRLNEFMAG
FNIITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIYNLSGGEKTL
SSLALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNMFEM
ADRLIGIYKTHNTTKNVGINPKTIVLKDVEVA
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgaaaactacgaaaagctcgtcggtggcgaagccccggggtaaggggtcgcag
gatgattcggaggatgagatgaaggaaataaagccccccagagaagtgcaggcagatgat
caggacgcaccgcagactcaggatgccactggcgaggaagcagtggataaccgggccctg
gaagagattctcggtagcatccccccacccccaccccccgccatgaccaacgaaccaggc
gctccccgccttatgatcacgcatatcgtcaatcggaacttcaaatcatacgcaggagag
caaattttggggcctttccataagcgcttttcctgtatcatcggtccaaacggcagtggg
aaatccaacgtgattgactcaatgctttttgtgtttggatacagagcgcaaaaaatcagg
tccaaaaaactttctgtgctcattcacagctctgacgggcacaaggagatccagagctgc
actgtagaggtgcactttcagaagattatcgacaaggaaggagacgactacgatgtcatc
cccgacagcaagttttacgtctcaagaacggccggtaaagataattcctcatcctatcac
atcaatggcaaaaaggcgacctttaaagacgttggaactttgctccgtagccatggcatc
gacctggaccacaaccgatttctcattctccagggagaagtggagcagattgccatgatg
aaacccaaaggccagacggagcatgacgaaggcatgctggagtacctggaggacatcatc
ggctcctgccgactcaaagagcctatcaacacgctgtgcagacgagtggagctactgaat
gagcagagaggggaaaagctgaatcgtgtgaaattggtggagaaagagaagaacgccttg
gagggtgagaagaataaagcggtggaatttctcaccctggagaacgacatgttcaagaag
aggagccaactctgccagttttatgtacatgatttgcagcagcgtgtgactgaaaaggaa
gcagaaaaacaagagatccaggaggacaccaagggcctgacagaaaaaagcaaccagctt
acagaggaaatgaaggggaagaatgaagccctgaagaatgtggagaaaaaagttggcaag
ttgaccaagttcattgagggccagaaagagaagttcacacagttggacctacaggacgtg
gaggtgcgcgagaagctcaagcacacaaagaacaagaccaagaaacttcataaacagcta
caaaaggacaaagaaaagttggaggaagtaaaaaatgttccttcgagcagtgaaaagatc
atcactgaggcttctgcccagaaagaagtgctggagaaagagaagattaaggaggaagcg
gctctggctcatgtgatggagcgcctgaaggaggagaccagtggtctgcagcaggagaag
gagcaaaatgaaaaggagcttctggagctgagtaaggctgtaaacgagacccgctcgaag
atggacgtagctcagtcagagctggacatttacctgagtcagcacaacatagccgtctca
cagcttaaccaggctaaagaggccctgcagggaaccgctgacacactccgagacagaaga
gccgccatcaaagagctgaaggtcaaagtgcccaagtgtgagcaagagcttaagaaggat
gaggaggagctaaaacagatttctgagcaagatggacaggtccaggctacagtcagggac
atgagacaaaaggttgaagaggccaagtcctctctgtcctccacccgcagccgaggcaaa
gtgctcgatgcgctcatgcagcagaaacgcagtggcaaaattcccggcatcctgggacgt
ctgggtgatctgggagccatcgatgagaagttcgacattgctatctcctcatgctgtggt
gcgctcgataacattgtagtggacaccattgacactgctcagaaatgcgtcaccttcctc
aaggctcagagtattggtgtagcaaccttcattggtctcgacaagatgaaggtctgggag
aaaaacacgaaggcgatctccacaccggaaaacatccctcgtttgttcgatatggtcaaa
gtaaaggatgaatgtgttcgtcctgcattctactttgccctgagagacacactggtggct
aaagacctcgagcaggcaacaagagtggccttccagaaagacaagcgctggagagtggtc
actttacagggacagatcatcgagcaggctggcactatgacgggtggaggaggccgtgta
atgaaaggcaggatgggctcttctattggcactgaggtcacgcaggaacagctggacaaa
atggagagcgcattaaaggagaaggtggcacagctgcagggctggcagcagaggaaacag
cagctcgaggagagtgtgcacaaacggaggcaggagctcagagacatgaagaacacgctg
gagaaatacaccgccagcattcagagtcttgaggagcaagaggttcacctgaagtcccag
ataaaggagctggaagcaaatgttattgctgctgccccggacaaagccaagcaaaaacag
atggaaaaaaacctggaagccttcaagaaaaattatgaggctgcgtccaacaaggctgga
aaggttgaggctgaggtgaaacgactccacaacctcattttggacatcaacagccacaag
ctgaaggcccaacaggacaaactggataagatcaacaaagagctagatgaatgttcatca
gcaatcaccaaagcccaagtggccatcaagacatcaggacgtaatctaaaaaaggcagag
gagacggtcacacgactggaaaccgagattgcagagaatgagaaattgatggaggagctt
acagagcagctgaagaaactggaggatcaagcaggagagatcatgaagtcctgccaggag
gctgaggaggcgctgcctgaggtgcaggaacaacatcgtggggtgttgcaagagatcaag
gcccttcaggagcaagaacacactttgcagaaagattcgctgaatgttcgactgaaagtg
gagcaaattgacactgccatcgccgagtgtcagaataaaatcaaacactgggaaaaagag
tccacaaagcttactctgcacacgattgatgacaaaccagcagaggaactacccaggctg
aacactgagcaattggaggctattaagagcgcagacatcatcaaaaacgagattgcactt
ttagaggaccgttgtgctcagatgaagcccaacctgggagctatagcagagttcaagaag
aaggaggagctttatttacagagagtagctgagctggatgagattaccaaccagagagac
aacttcaagaggagctgtgaggacctgcggaaacagagactgaacgagttcatggccgga
tttaacataatcaccaacaagctgaaggagaactaccagatgttgacactggggggcgat
gctgagctggagcttgtggacagcctagaccctttctctgagggcatcatgtttagtgtg
cgtcctcctaagaagagctggaagaaaatctacaacctgtctggaggagagaagaccctg
agctctttagctttggtcttcgcgctgcaccactttaagccaacacctctatacttcatg
gacgagatagatgccgctctggatttcaagaacgtgtccattgtggcctgctacatatat
gaacaaaccaagaatgctcagttcatcatcatctccctgaggaacaacatgtttgagatg
gctgaccgcctgatcggaatctacaaaacgcacaacaccactaaaaacgtgggaatcaac
cccaagaccatcgtccttaaagatgttgaagttgcttaa
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