Clarias gariepinus (North African catfish): 128513040
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Entry
128513040 CDS
T10780
Symbol
trpa1a
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1a
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128513040 (trpa1a)
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128513040 (trpa1a)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
128513040
NCBI-ProteinID:
XP_053342624
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Position
25:1875882..1888157
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AA seq
1103 aa
AA seq
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MRLSRTQPKSAPEYQCLTDMERNSCMSNNVFEWALEGNAPALEGHSGDLRVQDDGGASPL
HYASSKGHTRVITLILQIAGPQELDVVDDEGNTPLHWAVQQDQSGSCSALLSLGANPNIL
NKASLSPLHLAVSLRHNHIVEQLVTHSKTDVNLEGDLGNTPFILAASVDNHEALLILYRN
GANLCCQNKLGHFPIHAAAFAGAKRSMEVVLQKGEETGVCVEKHINYVDKSTSSPLHLAV
RGGNLEVIKLCIAHGAKIDQQQCDKSTALHFACTQGAAEAVKVMLQAYERVCDIINITDG
AFQTPLHKAAIFDHHELVEYLISQGADIDFIDCKGHSPLLLATSCGAWRSVNLLLSHGAD
LMVKDKAGCNFLHLAILQPRGLKNLPAEVLQHESVRELLNDEDAEGCTPLHYACRLGIPD
SVKNMLGLEVSLDQKSKQKKSALHFAAEYGRINTCHRLLETMTDTRLLNEGDEKGMTPLH
LASRGGHVKVVELLLRKGALFHSDYKGWSCLHHAAAEGYTQTMDSLLLSNIKLLDKADAD
GNTALHLAARAGHVAAVRLLLSRGAQIQLNRSDASFLHEAIHNGRQDVTSAVIDSDRCEE
AITTFKVTSAKRCPVLDMIEFLPECFKHLLDTCIKESDEDVNSCGYYLEYNFQWLQQPKQ
YAKKMEKSEMDNNYKPLAALNSMVEFNRVELLTHPVCKKYLEMKWHAYGVKAHLLNMTIY
ALGVFPLTFLIVNLRPNLSMEKNSTSINMLTKTLDKQCYFITTCMFLVLAMNLYAVGKEL
AQMYQQRFKYLRDPSNIADWASTICSLLFVIPLLLNVKRSWHWQAGALASLNSWVNLLLY
LQRFQRFGIYVVMFREICKTLLSIILIFFYLILAFALTFYALMIEQKHFGRLFLSLMQTF
AMMAGEINYQENFLKPYMGKHLPFPVLTYFIFIWFVLLVPILLMNLLIGLAVGDIAEVKN
NACLKQIGMQIELHTNLEERLPYWFVKRVDQLSVKEFPNKCYNGKRWFVCGGEVNKVRAR
LSSSTRQCTQLERELAKQKHRLKDLSDCMEKQHNLLKLIVQKMEINSEAEERDGPRVLHD
FTHRLSAHSKWGPLLRAVTAKRK
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtccagaactcagccgaagtccgctccagaataccagtgtctcaccgacatg
gagagaaacagctgcatgtccaataacgtctttgagtgggctctggagggcaacgccccg
gcgctggaaggtcactcaggtgatctgagggtgcaggacgacggcggagcctctccgctt
cactacgcctcgtccaagggccacacccgcgtcatcaccctgatcctacagatcgccggc
ccacaggagctggacgttgtggatgatgaaggaaacacacccctgcactgggccgttcag
caggatcagagtggaagctgttcggctctgctgagtctcggggcgaatcccaacatcctg
aacaaagcgtctctctcccccctgcacctcgccgtcagcctcaggcacaaccacattgtg
gaacaactggtgacgcacagtaagacggacgtgaacctggagggcgatctgggaaacacg
cctttcatcctggctgcgtcagtggacaaccacgaggcgcttctcatactgtacaggaat
ggcgccaatctgtgctgccaaaacaagctgggtcacttccccatccacgccgccgccttc
gcaggagccaagaggtccatggaagtggttctccaaaaaggagaggagacaggtgtgtgc
gtagagaaacatataaactacgtggacaagtccaccagcagtcctcttcacctggctgta
cgtggaggaaacctggaggtcatcaagctctgcatcgctcacggagccaaaatcgaccag
cagcagtgtgataagtccacagctctccacttcgcctgcactcagggagccgcggaggcc
gtgaaggtgatgctccaggcatacgagcgagtgtgtgacatcatcaacatcacagacgga
gcgttccaaacaccgctacataaggcggccatttttgaccatcatgagcttgtggagtat
ctgatctcacagggcgctgacattgacttcatcgactgtaaaggccactcgccactgctg
ctagcgactagttgtggtgcctggagatccgttaacctgctgctctcacatggtgctgat
ctgatggttaaagacaaagctgggtgtaacttcctccatctggccatcttgcagcctcga
ggtctgaagaaccttccagcagaagttctacagcacgagagcgtgagagagctgctgaat
gatgaagacgcagagggttgcactcctcttcactacgcctgcaggctggggatccctgac
tctgtgaagaacatgcttggcctggaggtctcactcgaccaaaagtccaagcagaagaaa
tcagcgcttcactttgcagctgagtatgggaggatcaacacgtgtcaccggctgctggag
accatgacagacactcgtctgctgaacgagggtgatgagaagggcatgacaccattacac
ctggcttcacgtggtggacatgttaaagtggtcgagctgctccttagaaaaggtgctttg
ttccacagtgattataaaggctggtcgtgtctacatcatgccgcggctgagggctacacg
cagaccatggacagcttactcctgtccaacatcaaactcctggacaaagccgacgcagac
ggaaacacggcactgcacttagccgcccgagccggacacgttgccgctgttcgcctgctg
ctgtccagaggagctcagatccagctgaaccgcagcgacgcttccttcctgcacgaggcc
attcacaatgggaggcaggacgtcacaagcgccgtgatcgacagcgacaggtgcgaggag
gccatcacaacatttaaagtaacctctgccaaacgctgccctgtcctggacatgatcgag
tttctccctgagtgcttcaagcatctcttagacacctgcattaaagagtcagatgaagac
gtgaactcctgcggctactacctggagtataatttccagtggcttcagcagccgaaacag
tacgctaagaagatggagaaatcagagatggacaacaactacaaacccctggctgcactc
aattccatggtggagtttaatcgagtcgagcttctgacccatccagtgtgcaaaaaatat
ctggaaatgaaatggcacgcgtacggtgtgaaagctcacttgctcaacatgaccatatac
gcactgggggttttcccactgaccttcctgatcgtcaatctgcggcccaatctgagcatg
gagaaaaacagcacgagcatcaacatgctcaccaagactctcgacaagcaatgttatttc
atcacaacctgcatgtttctggttctcgctatgaatttatacgcagtcggcaaagagtta
gcgcagatgtatcagcagaggtttaagtacctgcgcgacccgtcgaacatagcagactgg
gcgtcgaccatctgctctctgctcttcgtcattcctctcctgctgaacgtaaaaaggtcg
tggcactggcaggccggagctctggcatctcttaactcctgggtcaacctgctcctctac
ctgcagcggttccagaggtttggaatatatgtggtgatgtttcgggagatctgtaagacg
ctgctcagcatcattctgatattcttctacctgatcctggcattcgcgctgaccttctac
gctctaatgattgaacagaaacattttggtcgcctgtttctgtcgctgatgcaaacgttc
gccatgatggcaggagagatcaactaccaggaaaacttcttgaaaccctacatggggaaa
caccttcctttccctgtgctgacatactttatcttcatttggtttgtgctgctcgtgccg
attctgctcatgaatctgctgattggtttggctgtgggagacattgcagaggtgaagaac
aacgcctgtttaaaacagatagggatgcagattgaacttcacactaacctggaggagcgt
ctgccgtactggttcgttaaaagagtcgaccaactctctgttaaggaatttcccaataag
tgctacaacggaaagaggtggttcgtctgtggaggtgaagtgaacaaagtgagagcgagg
ctgagctccagcacacggcagtgcacacagctggagagagaactcgccaaacagaaacac
agactgaaggatctctctgactgcatggagaagcagcacaacctgctaaagctgatcgtg
cagaagatggagatcaactccgaggcggaggagcgtgacggccctcgcgtcctgcacgac
ttcacacacagactgagcgcccacagcaagtggggcccgctactacgcgctgttacggcc
aagaggaagtga
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