Clarias gariepinus (North African catfish): 128513138
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Entry
128513138 CDS
T10780
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128513138
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
128513138
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Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
LPD1
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
128513138
NCBI-ProteinID:
XP_053342767
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All DBs
Position
25:17276688..17344961
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AA seq
1111 aa
AA seq
DB search
MDRNELSPGSGVVTHKPAVVSGCGATSIHCASRCDTRLSNQCGPNNHDMMDEAEDSEEDP
KFQHPRLRRAGGTGGGGGGVGASAAGGGGGGGGGAGKMQNFASGGGSAHKSSSNDEIPAL
QDTPERVDQVEVVAPTDAAVRTFAPARLSDAAARDEPDPGKASPLALTVDACHVPGEGGG
HGAAPVSAMKCNKNGECRRGSGTGSLRSIMSKQDKQDANKRATTCSTSGSDAPAGPRDSS
SPAAGGVPEKKDSKVSFSNAPSRKASASTQSQQPRNSVTFLKSEDGAQIAAEDGEARGSQ
ASFMQRQFGSMLQPGVNKFSLRMYGSQKAVEREQERVKSAGKWIIHPYSDFRFYWDFTML
LFMVGNLIIIPVGITFFKEETTTPWIIFNVVSDTFFLMDLVLNFRTGIIIEDNSDIILDP
KVIKKKYLKTWFVVDFVSSIPVDYIFLIVEKGIDSEMYKTARALRIVRFTKILSLLRLLR
LSRLIRYIHQWEEIFHMTYDLASAMMRIFNLIAMMLLLCHWDGCLQFLVPMLQDFPSDCW
VSLNKMVNDTWSELYSFAVFKAMSHMLCIGYGRQAPESLSDIWLTMLSMIVGATCYAVFI
GHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEESIL
EELNEPLREEIVNFNCRKLVASMPLFANAEPNFVTAMLTKLRFEVFQPRDYIIREGTIGK
KMYFIQHGVVNVLTKGTLGMKLSDGSYFGEICLLTRGRRTASVQAETYCRLYSLSVDNFN
EVLEEYPMMRRAFETVAIDRLDRLGKKNSILMHKVQHDLNTGVFNNQENEMIQEIVKYDR
EMVKLVDFQRPRAMSMTASIPGGIFAPPGQAQGTSAIATLQQAVAMSFCPQMANPLVGPG
TLQSPRMVRRFQVIQNISSPASVSPMQPQPPGPMPGGACASAATSSPPGQSPMAPMGSRT
FQYGCSPMGGRTGSQLSLVQQHVPSPTRKGAHSLQHVESMSQDARALSSSQTSLPQDGVT
VVGTSPPLSAHVSSTSIGQQPAPHPAIPGPSGIRSAVPHRIVQPHPMSPSTPPPVGGAGP
SYLEPIVHKKDSIVSLPETDSTIRSRLSSNL
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggaccggaacgagctttccccaggttctggagtcgtcacgcataagcccgcggtcgtg
agcggttgtggcgcaacgtcgatccactgcgcaagccgctgcgacaccagactgtccaac
cagtgcggcccgaacaatcacgacatgatggacgaggcggaggacagtgaagaagatccc
aagtttcaacaccctcgacttaggcgagccggtggcaccggaggaggaggaggaggtgtg
ggagcatcagcagcaggaggaggaggaggaggaggaggaggagcggggaagatgcaaaac
ttcgcgtcgggagggggatccgcgcacaagagctcctccaacgacgagatcccggctctc
caagacactccagagcgagtcgatcaagtagaagtagttgctcccacagacgcagcggtt
cggacgttcgcgcctgcgcgtctgagtgatgcggcggcgcgcgacgaacccgatcccggc
aaagcgtctcctctcgcgctcaccgtagacgcctgtcatgttccgggagaaggaggcggc
cacggcgcagctccggtttccgcaatgaagtgcaacaaaaacggcgagtgcagacgaggc
tccggcaccggcagcttgcgctccatcatgtccaaacaggacaagcaggacgcgaacaaa
cgcgcgacgacctgctcgacttcgggctcggacgcgcccgcgggccccagggactcctcc
agtcccgccgccggcggcgtccccgagaagaaggactccaaggtgtcgttctccaacgcg
ccgagtcgaaaagcgtccgcttccacgcagagccagcagcccaggaactccgtgacgttc
ctcaagtccgaggacggggcgcagatcgcggccgaggatggcgaggcgcgcgggagccag
gcgagtttcatgcagaggcagttcgggagcatgctccagccgggggtcaataaattctcc
ttacggatgtacggcagccagaaagcggtggagagagagcaggagcgcgtcaagtcagcc
gggaagtggatcatccacccttacagcgacttcaggttctactgggactttacaatgctc
ctcttcatggtgggcaacctgattattattccagtaggcatcacgttcttcaaagaggag
accaccacaccttggatcatcttcaacgttgtctccgacaccttctttcttatggacctg
gtgctcaacttccgcactggcatcatcatcgaagacaactctgacatcatcctggatccc
aaggtcattaagaaaaagtacctgaagacatggtttgtggtggactttgtctcgtccatc
cctgtggattacatctttctcattgtggagaagggaatagactcggagatgtacaagacg
gcccgggccctgcgcatcgtgcgcttcaccaagatcctcagtctgctgaggctgctgaga
ctctcccggctcatccgctacatacaccagtgggaggagattttccacatgacctatgac
ctggcgagtgccatgatgcgcatctttaacctgatcgcgatgatgctgctgctgtgccac
tgggacggctgtcttcagttcctcgtgcccatgctgcaggacttcccctctgactgctgg
gtctctctcaacaaaatggtgaatgacacttggagtgagctgtactcctttgccgtgttt
aaggccatgagtcatatgctctgtataggttatggccgtcaggctccggagagtttgtct
gatatttggctgaccatgctcagcatgatcgtaggagccacctgctacgccgtcttcatc
ggccacgccaccgctctcatccaatcgctggactcctcccggcgacagtaccaggaaaag
tacaagcaagtggagcagtacatgtccttccacaaacttccagcagatttccggcagaag
atccacgactactacgagcaccgctaccagggaaagatgtttgatgaggagagcatcctg
gaggagctgaacgaaccactccgagaggaaatcgtaaacttcaactgccgtaagttggtg
gcctcgatgcccctgtttgccaacgctgagcccaactttgtcacggcaatgctaactaag
ctccgcttcgaggtcttccaaccccgggattacatcatccgcgaaggcaccattggcaaa
aagatgtacttcatccaacacggcgtggtcaacgtcctcaccaaaggaactctaggaatg
aagctatccgacggctcctattttggagaaatctgtttgctaactcgagggcgccggaca
gcaagtgttcaggcagagacatactgccgtctttactcactctctgtggacaacttcaac
gaggtactagaggagtaccctatgatgagaagagcatttgagactgtagcaatcgacaga
cttgatcgtctaggtaagaagaactccatattgatgcacaaggtacaacatgacctcaac
actggagttttcaacaatcaagagaatgaaatgattcaggaaattgtgaagtacgaccgt
gagatggtcaaactggtggactttcaacgtccacgtgccatgtctatgacagcttcaatc
cctggtggcatatttgccccacctggccaggcacaaggcacctcagccattgccacccta
cagcaggccgtagccatgagcttctgcccacaaatggctaatcctttggtgggcccgggc
actctacaatccccccgcatggttcggcgcttccaggtaatccagaacatttccagccct
gcatcggtctctcctatgcagccacagccaccaggccccatgccagggggtgcatgtgct
tccgctgccacatccagtccacctgggcagagtccaatggcaccaatgggatcaaggaca
ttccagtatggttgtagccccatgggtgggcgtacaggatctcagctgtcccttgttcag
cagcatgtgcccagtccaacacgcaagggtgctcactccttgcaacatgtggaaagcatg
agccaagatgcacgcgcgttgtccagttcccaaacctctttgccccaggacggagtgaca
gttgtgggtaccagcccaccactgtcagcccatgtttcctccacatccattgggcaacag
ccggcccctcaccctgcaatacccgggccctctggaatcagaagtgctgtacctcacaga
atagtacagcctcacccgatgtcaccttccactccgccccctgttggtggagcagggcca
agctatcttgagccaatagtgcacaaaaaagattctatagttagcctccctgagacagac
tcgactattagatccaggctgtcctcaaacctctga
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