Clarias gariepinus (North African catfish): 128513144
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Entry
128513144 CDS
T10780
Symbol
cul1a
Name
(RefSeq) cullin-1a
KO
K03347
cullin 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04110
Cell cycle
cgar04114
Oocyte meiosis
cgar04120
Ubiquitin mediated proteolysis
cgar04141
Protein processing in endoplasmic reticulum
cgar04310
Wnt signaling pathway
cgar04340
Hedgehog signaling pathway
cgar04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128513144 (cul1a)
04120 Ubiquitin mediated proteolysis
128513144 (cul1a)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128513144 (cul1a)
04340 Hedgehog signaling pathway
128513144 (cul1a)
04350 TGF-beta signaling pathway
128513144 (cul1a)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128513144 (cul1a)
04114 Oocyte meiosis
128513144 (cul1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128513144 (cul1a)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
128513144 (cul1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
IntS11_C
Motif
Other DBs
NCBI-GeneID:
128513144
NCBI-ProteinID:
XP_053342777
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All DBs
Position
25:21664329..21683205
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AA seq
777 aa
AA seq
DB search
MSSTRSQNPHGLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSN
QARGPGIPQSKPSKKAPTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFY
TQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQV
TNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLSVFKEYFETQFLAD
TERFYTRESTQFLEQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKH
LEIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLETHIYNQGLAAIEKCGEAA
LNDPKMYVQTILDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTRMVQSSSKSP
ELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNS
ASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLDFSIQV
LSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTWLYHLSKGELVTNCFKNRY
TLQASTFQMAILLQYNTEDVYTVQQLTDSTQIKIDILVQVLQILLKSKLLVLEDENANVD
EVEFKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIM
KMRKMLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctaccaggagccagaaccctcacggactcaaacagattgggctggaccagatc
tgggatgacctgcgagcaggcattcagcaggtgtacactcgccagagcatggccaaatct
cgctacatggagctatacactcatgtgtataattactgcaccagtgtgcaccaatcgaac
caggcccgcgggccgggcatcccccaatccaaaccttccaagaaggcacccactccagga
ggagcccagttcgtgggcctcgagctctacaagagactaaaagagttcctgaagaattac
ttgactaacttactaaaggacggtgaggacttaatggacgagagcgttctgaagttctac
acgcagcagtgggaggattaccggttctcaagcaaagtgctcaatggtatctgtgcctac
ctcaaccgccactgggtgcgccgcgaatgtgacgagggtcgcaaagggatctacgaaatc
tactctctggccttagtgacctggagagaatgcctgtttcggccgctgaacaaacaggtt
acaaatgcagtattgaagcttattgagaaggagagaaatggagagacgatcaacaccaga
ctcatcagtggcgtggttcagtcctacgttgagctgggtctgaacgaggatgacgccttc
gccaaaggtcccactctgtccgtctttaaggaatacttcgagactcagttcctggctgac
actgagcgcttctacacaagggaaagcacacaattcctcgagcagaacccggtcactgag
tacatgaaaaaggcggaggcacgtttgttggaagagcagaggagggtacaggtctacctc
catgaaagcacgcaagatgagctggccagaaagtgtgagcaggttctcatcgaaaagcat
ctggagatctttcacacagagttccaaaatcttctggatgcagacaagaacgaagatctc
ggccgtatgtacaatctggtgtctcggatcacagacggtttaggagaactcaagaagctt
ctagaaacgcacatctacaaccaaggccttgctgctatcgagaaatgtggggaagctgct
cttaatgaccccaaaatgtacgttcagactattttggacgtccataagaaatacaacgca
ttggtgatgtctgcgtttaataacgatgctggctttgtcgctgcactggataaggcttgt
gggcgcttcatcaacaacaatgccgtcaccaggatggtccagtcgtccagcaagtctcct
gaacttctggctcgatactgtgactctctgcttaagaaaagctctaaaaacccagaggag
gcagagcttgaggataccctaaatcaagtgatggtggtgtttaagtacattgaggataaa
gatgtgttccagaagttttatgcgaaaatgctggcaaagcgcctggtccaccagaacagc
gccagcgacgacgccgaggccagcatgatctccaaactgaagcaagcatgtggcttcgag
tacacgtccaagcttcagcgcatgttccaggacatcggcgtcagcaaggaccttaacgag
cagttcaagaagcacctcactaattcggagcctttggacttggatttcagtatccaggtg
ctgagctccggttcctggcctttccagcaatcctgcacttttgcgctgccctctgagttg
gagaggagctaccaaaggttcacagccttttacgccagcagacacagcggccgcaaactc
acctggctgtaccacctgtccaaaggagagctggtcaccaactgcttcaaaaacagatat
accctgcaggcttcaacgtttcagatggctatactcctacagtacaacacagaggacgtg
tacacggtccagcagttgactgacagcacacaaattaaaatcgacattttagtacaggtc
ctacagattttattgaagtccaaattgctggtcctggaggatgagaatgctaacgtggat
gaggtggagtttaaaccagacaccctcataaaactctacctgggctataagaataaaaag
ctgcgagtgaacatcaacgtgccgatgaagacggagcagaaacaagagcaggaaactact
cacaaaaacatcgaagaagatcgaaagcttttaatacaggcggccattgtgcgcattatg
aagatgaggaagatgctgaagcaccagcagctcctggctgaggtccttaaccagctctcc
tccaggttcaagccccgagtccctgtcatcaagaaatgcatcgacattcttatagagaag
gagtacttggaaagagtggacggagagaaggacacttacagctacctggcttaa
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