Clarias gariepinus (North African catfish): 128513209
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Entry
128513209 CDS
T10780
Symbol
shox2
Name
(RefSeq) short stature homeobox protein 2 isoform X1
KO
K09331
short stature homeobox protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128513209 (shox2)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
128513209 (shox2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
MRP-L20
KBP3
HAUS1
AcrF31
Motif
Other DBs
NCBI-GeneID:
128513209
NCBI-ProteinID:
XP_053342878
LinkDB
All DBs
Position
25
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AA seq
300 aa
AA seq
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MMEELTAFVSKSFDQKVKEKKEVITYREVLETGSARAREALPVEAGREDTSLLARAAVAR
SPVREADMTGPERTRDTGSPKLTDGILDVKDRKEDTKPIEDETQTKIKQRRSRTNFTLEQ
LNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVLIGAA
SQFEACRVAPYVNVGALRMPFQQDSHCNVPPFSFQVQAQLQLDSAVAHAHHHLHSHLAAH
APYMMFPAPPFGLPLATLAAESASAASVVAAAAAAKNSNKNSSIADLRLKAKKHAAALGL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagaactcaccgcgttcgtgtccaaatcctttgatcagaaagtgaaagagaaa
aaagaagtgatcacgtaccgggaagtgctggagacgggctcggcgcgcgccagggaagcg
ctcccggttgaagcggggcgcgaggacacgagccttctggcgcgggcagccgtcgcgcgc
tcaccggtcagagaagcggacatgacaggaccggagaggacgcgggacacggggagtccc
aaacttacagacggcatcctggacgtgaaagaccgaaaagaagacaccaaaccgatagag
gacgagacgcagaccaaaatcaagcagaggagaagtcggactaactttaccctggagcag
ctgaacgagttggagaggctatttgacgagacgcattatccggacgcgttcatgcgcgag
gagctgagtcagcggctcgggctctccgaagcgcgcgtccaggtctggtttcaaaacagg
agagccaaatgcagaaaacaggaaaatcaattacacaaaggggtgctcatcggagctgcg
agtcagtttgaagcgtgccgcgtcgcgccatatgtcaacgtgggagctttgcgcatgcca
ttccaacaggatagtcattgcaacgtgccacccttctcctttcaggtgcaggcgcagctg
cagctggacagcgccgtggcgcacgcgcaccatcacctgcactctcacctggcggcgcat
gcgccgtacatgatgttccctgcaccgccgttcggcttgccgttggcgacgctggcggcg
gagtcagcctcggcggcgtcggtggtggccgcggctgccgccgccaagaacagcaacaag
aactcgagcatcgccgacctgagactgaaggccaaaaagcacgcggcggcgctcggactg
tga
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