Clarias gariepinus (North African catfish): 128513327
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Entry
128513327 CDS
T10780
Name
(RefSeq) HERV-H LTR-associating protein 1
KO
K25558
HERV-H LTR-associating protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
128513327
SSDB
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Paralog
GFIT
Motif
Pfam:
HHLA1_N
Motif
Other DBs
NCBI-GeneID:
128513327
NCBI-ProteinID:
XP_053343040
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Position
25
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AA seq
474 aa
AA seq
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MSVVYVCFSGMTKFKLNQWITMRISVAIVTLLPICTTVPNHSQWEREFLASTEIPAEHID
PGSIDLTSLMNTLLNSSHAGSEHLFSVLSVTSHSTLALHKITLLVYNISSFQDIETTLFP
LRYCYCVTNKTNDLTDFTAILLDVMGNSTSYLQELFKSSSILSVNQMRSSDCIYICVMAG
KTDSNQSELWDSVSPLFNHTIMEHTHTAISADFPASSTINPDVSLTSSTSSLTSTTTTAA
TSFATLTVATTGHMTAVPSAVSIVTAGVNTTGATLTAVSMKTMPASILVPASDIVLPSAQ
TSPARSTAAPPEPPATTSTQPAHSSVSMTTTPSAHPVMANTATEVSKPIPASAKTSPATS
RTPHVEKPGCPWQSELIYRGSQRKDQKETLDEDLSVNNPTVSITKLQPCVFELCKFFSQC
LCRGFSQKTSLQRYCIDSHFWYEKHTVEVCSRVRRLTFSRSLKQKCLAKMCVKM
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggtttatgtttgtttttcagggatgactaaatttaaactaaatcaatggatc
accatgagaatcagtgttgccatagtaactctgctgcctatttgcacaacagtaccaaat
cacagtcagtgggaaagagaatttctagcttcaacagaaattcctgcagaacacattgac
cccggttccattgacctgacttcattaatgaacacactccttaattcctcacatgcaggt
tctgagcatttgttctctgtcctgagtgtgacatcacacagcactcttgcactgcacaaa
atcaccctgctggtctacaacatctctagttttcaggacattgagaccactttgtttccc
ctgagatactgctactgtgtgacaaacaaaaccaatgacctcacagattttacagccata
ctgctagatgtgatggggaactcaactagctacctacaggagctgtttaaatctagctct
attctttctgtaaaccagatgagaagttcagactgtatctacatctgtgtaatggctggt
aaaacagacagcaatcagagtgagctatgggattctgtttctccactgttcaaccacact
ataatggagcacacacatacagctatatcagcagatttcccagcatcctccaccataaac
cctgatgtttctttgacttcttccacttcttctctgacttcgaccaccaccactgcagct
acatcttttgccactttaactgtggcaaccactggtcacatgacagcagtaccttctgct
gtgtcaattgtgacagctggggtgaatactactggtgctacacttacagcagtttccatg
aaaacaatgcctgctagtattctcgtcccagcatcagacattgttttaccatcagctcaa
acatcaccagcaagaagcactgcagctccacctgaaccaccagccacaacttccacccaa
cctgctcattccagtgtttccatgacaaccacaccttcagcacatccagtgatggctaat
acagcaacagaagtatcaaaaccaattcctgcttcggcaaaaaccagtccagctaccagc
agaacccctcatgttgaaaaaccaggttgcccatggcaatccgagctgatctatagagga
agccagagaaaagaccagaaagaaactctggatgaggatctgagtgtgaacaatcctacg
gtcagcataacaaagctgcagccatgtgtgtttgaactgtgcaagttcttctcccagtgt
ctttgcaggggtttcagccagaaaactagtctgcagaggtactgcatagacagccatttc
tggtatgaaaagcacacagtggaagtctgtagtcgtgtaagaagactcaccttctccagg
agtctgaagcagaagtgcctggcgaagatgtgtgttaaaatgtga
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