Clarias gariepinus (North African catfish): 128513346
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Entry
128513346 CDS
T10780
Symbol
taf15
Name
(RefSeq) TATA-binding protein-associated factor 2N isoform X1
KO
K13098
RNA-binding protein FUS
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03015
mRNA surveillance pathway
cgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128513346 (taf15)
09122 Translation
03015 mRNA surveillance pathway
128513346 (taf15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128513346 (taf15)
Spliceosome [BR:
cgar03041
]
Complex A
Other components
Complex A specific factors
128513346 (taf15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
128513346
NCBI-ProteinID:
XP_053343066
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All DBs
Position
25:complement(8186064..8192477)
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AA seq
456 aa
AA seq
DB search
MSSDSGYGQPGAPQSYGSYGGAQGYQHGGGGGGGGGGQGYGQGNGSSSYGGQNYEGYGQS
ESFGQSSQSYSGYGQQPQSYEGYGQQGSDSSSGYGDKSYGQQSSYSQPSSYGQQGSYAQQ
GSYGQQSEGGQSGASYSGPAGGYGRRNEGENRRFGGDEGGDRSEGYRGRGRGGYDRGGYD
RGGYDRGGFDRGGRGGGPPSGMGGGDRGGYKNFGGPRDYGQRDDAGEEQDNSDNNTIFVQ
GLGEDVTTHEVADFFKQIGIIKVNKKTGKPMINLYTDKATGRLKGEATVSFDDPPSAKAA
IDWFDGKEFNGKPIKVSFATRRAEFSQRGGGGGGGGRGRGGFRGRGGFGGGPNFDVKGGD
WLCPNSSCGNMNFARRYECNKCGAPKPGDSFGDRGGRGGFSGDRGGFRGGRGGGFRGGDR
GSYGGGGGGGDRGSYGGGYKMGGRGEHREERRDRPY
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgactcaggctacgggcagcctggtgccccacaaagctatggatcctatggt
ggagctcagggctatcaacatggtggtggtggtggtggtggcggcggcggacagggatac
ggacaaggtaatggaagcagctcgtatggtggacagaattatgagggctatgggcagtca
gagagttttggtcagtcgtcacaaagttactctggctacggacagcaaccgcagagctat
gaaggctatgggcagcaaggctctgattcttcatcagggtatggggacaagtcttatgga
cagcaaagctcctatagtcaaccaagctcttatggtcagcaaggttcttatgcgcagcaa
ggctcatacgggcagcagtctgaaggtggacagtctggggcatcatacagtggtccagca
ggtggttatggaagacgtaatgaaggtgagaacaggcgatttggtggtgatgaaggaggt
gacaggtctgaggggtacaggggcagagggcgtggtggctacgatcgtgggggctatgac
cgcgggggttacgatcgtggtggttttgaccgaggtggaagaggaggaggaccaccctct
ggtatgggtggtggtgaccgtggtggctacaaaaatttcggtggacccagagattatggt
caaagggatgatgcaggtgaagaacaggacaactctgacaacaatacaatttttgtccaa
ggccttggagaggatgtcacaactcatgaagttgctgactttttcaaacagattggaatt
attaaggtaaataaaaagactggcaaacctatgattaacctgtacactgataaagctact
ggtagactaaagggtgaagccacggtctcatttgatgatcctccttctgctaaagctgcc
atcgattggtttgacggcaaggagttcaatggaaagcccattaaggtgtcatttgccaca
agacgggcagagttctcccagagaggaggaggaggaggaggaggagggagaggacgtgga
ggtttcagaggtcgaggtggctttggtggaggccctaattttgatgttaagggaggagac
tggctttgtcccaacagctcttgtggaaacatgaactttgcacggcgatatgagtgcaac
aaatgtggtgcaccaaaacccggtgacagttttggagaccgtggtggtagaggaggcttc
agtggtgaccgtggtggtttcagaggaggaagaggaggtggcttcagaggtggggaccgt
ggtagttatggtggtggtggcggcggcggcgatcgcggcagctatgggggtggatacaag
atgggaggaagaggtgagcacagagaggaaagaagagaccggccctattaa
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