Clarias gariepinus (North African catfish): 128513384
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Entry
128513384 CDS
T10780
Symbol
ncapd2
Name
(RefSeq) condensin complex subunit 1
KO
K06677
condensin complex subunit 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128513384 (ncapd2)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
128513384 (ncapd2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cnd1
Cnd1_N
Adaptin_N
HEAT_2
HEAT
Nipped-B_C
INTS1_R4
Cnd3
Proteasom_PSMB
HEAT_EZ
Myb_DNA-bind_5
Motif
Other DBs
NCBI-GeneID:
128513384
NCBI-ProteinID:
XP_053343109
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All DBs
Position
25:complement(12544196..12564112)
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AA seq
1381 aa
AA seq
DB search
MSWDFAVPVALDDLLKSGAINQYVVQSVLSPKQMPSYLNSLKATLRSRGPLCILEHFDTA
YSVLQNFRTVDVTLKENTLELLIQVVQALSVSLPPLLLAGSLSAADRKEQLNAVKMSVFL
LCKLTEYLESDSNRESVVTAPSKGRKKEKAGGKGLLHWDSERETVLQCLTQLLQLDVRSL
WSLSLVEEEFVSCVTCCCYKLLENPTISHMKSKPTRDAIIHVLGLMVKKYNHMLGACVKV
IQLLQHFEQLSSVCAQAVAAWSSEYGVKAIVGEIMREIGQKSSDELAREGSGVKAFSSFL
SELSTLVPETMIPNISVLLTHLDGESSSMRVAVCEVLGEVLVRVLSGDKLDDSSRADRDR
FLDTLQEHIHDAHSHVRARVLQVYTRVVNSKALPLCRYTEVMELAVGRLGDKSVHVCKSA
IQLVAAFIAHNPYSCKLSSVDLKKPLEKETGKLKEMRENMREKAPVPVISASDLWAAMEP
EVSHTVRAHLEANNDSDRDEEEEKKDERCNTDRDTAVQIAQYLRHNKYRQAVRLCVQAYT
LYPESPFFSALSSMNADTLISTLASVFKGPEEEQASDIVANDQPPAPQTEGECDEKESEL
KKQEMLVQYLKDTESFALQVERAIAVINNMLYWKTTTVVQEAVQFCVTACEFSVADSVCG
VRKMLPLVWSSDAAVKDAVVQAYRRLYLNPQGDNTRTKAQTLVESLSELMVDASLGTIQC
LEEIVQEFFSTEGALQASVVQVLWERFSGKRETSALHRRAAVLLLGMAARAEREVVLGNL
DTLCSVALGEKVTEDYLLARDTVITITNITDHIRQSKGPAFRLPMDHHLFSCLTQAVADG
VILSDPHWQTFMEQAVRLIYFLAESPDQLCACLLQRSARLLLEQITECGEQSQMSEGSQD
SQDSQEQKVNCVGLAQLLSLCGFVAFWQVSHLERSVSTELRRRRGEKEEKEEKEKGPVNK
NKETNDSCVEEELGLTGASAEDTEAEFIRKICETELLAEGNMLSVFLPLLVKVCSSPGRY
SHTQLTTAACLALSQFMMISPTVCKDNIRLLFTVLEKSPLPVVRANAIIALGDLTVRFPN
ILEPWTPNLYARLCDENVSVRLTAITVLTQLVLKDVMKVKGQVSEVAALLLDPEPHIANL
AVNFFNELAGKDNAIYNLLPDIISRLSDPERGMKEEDFSSVMKQLFSYITKERQTESLVE
KLCQRFRTAKTERQWADLAVSLSLLSMCERGFKKLQECWECYSDKLTEDAVYQPLLSILA
KLRRRAKPQLKTQIEEFEKKLTAVHTKGLENVENQEREQQLEEQKNTPVPKSARRPTRGR
GKSRMDDSDLVTPKPSRARPKATITFSSDEGEEEEDAVMAESETPKVTTPISRTRRTRLR
H
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggatttcgccgtgccggttgctttggatgatctgctaaaatccggagctata
aaccagtatgtggtccagagtgtgctgtctcctaaacagatgccctcttacctcaacagc
cttaaagctactttgagaagtcggggcccgctgtgcatcttggagcattttgacactgca
tacagtgtcctgcaaaactttcgcacagtagatgtgactttgaaggagaacacccttgag
cttctcatacaagtggtccaggccctgtccgtgtccttgccacccctcctcctggctgga
tctttgtcagcagccgaccgcaaagagcagctcaatgctgtcaagatgagtgtgttcctg
ctctgcaagctcactgaatatctagagagtgactccaacagggagagtgttgttactgca
cccagcaagggtcgtaaaaaggagaaagcagggggtaagggcttgctgcattgggacagt
gagcgcgagacggtgttgcagtgtctgacccagttgcttcagctggatgtccgctctctg
tggagtctttctctagtagaggaagaatttgtaagctgtgtgacatgttgctgttataag
ctattagaaaatcccaccatcagtcacatgaagagtaaacccactcgtgatgctatcatc
catgtactggggctaatggtgaagaaatacaaccacatgcttggagcgtgtgtgaaggtg
attcagctgctgcagcactttgagcagctctcctcagtgtgtgcacaggcagtggcagcc
tggagctcagagtatggagtaaaagcgattgtaggagagatcatgagggagattgggcag
aagtccagtgatgagttggctagagagggatcaggtgtaaaggccttttctagctttttg
tctgaactcagtacccttgtaccagaaaccatgatccctaatatcagtgtgcttctcaca
cacctggatggagagagttccagtatgcgtgtggctgtgtgtgaggtgctgggggaggta
ctggtacgtgtgttaagtggtgataaattggacgattccagtcgagcagatcgagaccgt
ttcctcgacaccctccaggaacacatacatgacgcacattcgcacgtcagagctcgagtg
cttcaagtgtacacccgtgttgtcaatagcaaggctttgccgttatgtagatacactgaa
gtgatggagttggctgttggtcgtcttggtgataaatcagtccacgtgtgtaagagtgcg
atccaacttgtggctgctttcatcgcccataatccctacagctgcaagcttagcagtgtg
gatttaaagaaacctctggaaaaagagaccgggaagctcaaagagatgagggagaacatg
agggagaaagcaccagtcccagtaatctctgcatctgatctgtgggctgcaatggagccg
gaggtctcgcacacagtcagggctcatcttgaagctaacaatgactctgacagggatgag
gaggaagagaaaaaagacgaacgttgcaacactgatcgagacactgctgtccaaattgct
cagtacctcagacacaacaaatacaggcaagcagtacggctgtgcgtgcaagcttacact
ttgtacccagagtctccattcttctctgctttgtccagtatgaatgcggatacactgatt
agcacgctggcatcagtctttaaaggtcctgaggaggaacaggcttcagatattgtagcg
aatgatcagccccctgcaccacaaacagaaggagagtgtgatgagaaggagagtgagctg
aagaaacaggagatgttggttcagtacctaaaagatacagaaagctttgccttacaagtt
gagagggccatagcagtcattaacaacatgctgtattggaagaccactacagtggttcaa
gaggcggtacagttctgtgtgactgcatgtgagttcagcgttgcagactcggtgtgtgga
gtgaggaagatgctgccactggtctggtcctctgatgctgcagttaaagatgctgttgta
caggcatacaggcgcctctacctgaaccctcaaggagacaacactagaaccaaggcccaa
actcttgtggagagtctgtctgagttgatggttgatgcctcattgggaaccattcagtgt
ttggaggagatagtgcaggagtttttcagcactgagggtgctttgcaggcatctgtggtg
caggtgctttgggaaagattttcaggaaagagggagacctcggcattgcacaggagagct
gcagtactgctgcttggcatggccgcacgagctgagagggaagttgtacttggtaacttg
gacacactctgctctgttgcattgggagagaaggtgactgaagattacttgctggccaga
gacactgttatcaccatcaccaatattactgaccacataaggcaatccaaaggacctgca
ttcagacttccgatggaccaccatctctttagctgtttgacccaggctgttgctgatgga
gtgatattgtccgacccccactggcagactttcatggagcaggcagtccgcctcatctac
ttccttgcagagtcaccagatcagctgtgcgcttgcctactccagcgctcagctcgccta
ctgctggagcaaattactgagtgtggggagcagtcacaaatgtcagaaggctcccaggac
tcccaggattcccaggaacagaaagtaaactgtgttggtctggcacagctactctccctc
tgtggcttcgtggccttctggcaggtgtctcacctggagagaagtgtgagtacggagctt
cggcggcggagaggagagaaggaggagaaagaggagaaggagaaagggcctgtcaacaag
aacaaggaaaccaatgacagttgtgtagaagaagagcttggcttgactggtgcttcagca
gaggacacagaggcagaattcatacgtaaaatctgtgaaacagaactgttagctgaaggg
aacatgctcagtgtgtttttgcctttgctggtgaaggtgtgcagctcacctggtcgctat
tctcacacccagctcaccactgctgcctgtctcgccctctcccagttcatgatgatcagc
ccaacagtttgtaaggataatatccgtttactcttcactgtgttggagaaatctcctctc
ccagtcgtcagagcaaatgccatcattgcccttggagacctgacggttcggtttcctaat
attttggaaccctggacccccaacttgtacgccaggctgtgtgatgaaaatgtgtcagtg
cgcctgactgccatcacagttctgacccaattggtgctaaaggatgtaatgaaggtcaaa
ggtcaggtcagtgaggttgctgcgctcctgcttgaccctgagccacatattgccaacctt
gcagttaatttcttcaatgaattggctgggaaggataatgcaatctataatctgctgcca
gatattataagcagactgtcagatccagagcggggcatgaaagaagaggacttcagctct
gttatgaagcaactcttttcctacataactaaggaaaggcagactgagagtttggtggag
aagctctgtcagcgtttcagaactgccaagacggagcgacagtgggcggacctggctgtt
tctctgtcactactctccatgtgtgagcgaggctttaagaagctgcaggagtgctgggaa
tgttatagtgataaacttactgaagatgcggtttaccaacctctgctctccatcctggcc
aaactccgccgcagagccaagcctcagcttaaaactcagatagaggagtttgagaagaag
ttaacagcagtgcatacaaaaggcctagagaatgtggaaaatcaggaaagagagcagcag
ctagaggagcagaaaaacactcctgtgcccaaaagtgctcgcaggccaacacgaggtcgt
gggaagtccaggatggatgacagtgacttggtgacccccaaaccctctcgggctcgccct
aaagcaacaatcacctttagcagtgatgaaggagaggaggaggaagatgctgtcatggca
gagagtgagactccaaaagtcaccacacccatttctcgtacccgacgcactcgtctacgc
cactag
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