Clarias gariepinus (North African catfish): 128513785
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Entry
128513785 CDS
T10780
Symbol
gars1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128513785 (gars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cgar01007
]
128513785 (gars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgar03016
]
128513785 (gars1)
03029 Mitochondrial biogenesis [BR:
cgar03029
]
128513785 (gars1)
Enzymes [BR:
cgar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
128513785 (gars1)
Amino acid related enzymes [BR:
cgar01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
128513785 (gars1)
Transfer RNA biogenesis [BR:
cgar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
128513785 (gars1)
Mitochondrial biogenesis [BR:
cgar03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
128513785 (gars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
DUF5915
OS-D
Motif
Other DBs
NCBI-GeneID:
128513785
NCBI-ProteinID:
XP_053343295
LinkDB
All DBs
Position
26:21134666..21149411
Genome browser
AA seq
751 aa
AA seq
DB search
MLRRATSAVLRSGAEISAAVVFILSRTKARPEPLCTSRVIRPFCLTACLSKKKRKGSVWS
EQREGEKMDGSMEEILAPLRQAVKEQGDLVRQMKTDGAPDVDVSKAVAELKARKKILEAK
ELSLQSKDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQAWRQH
FIHEEQILEIDCTMLTPESVLKTSGHVDKFADYMVKDVVNGECFRADHLLKAHLQKLMSD
KKCPQEKKSEMEEVITQMDNYTQQELADLFVKYNVKSPSTGNDLTSPISFNLMFQTSIGP
GGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTM
AEIEHFVDPNEKVHSKFSSVADLEILLYSSKAQTSGQSAKIMKLGDAVEQGVINNSVLGY
FIGRIYLYLTRVGLAKDKVRFRQHMDNEMAHYACDCWDAEAKTSYGWIEIVGCADRSCYD
LTCHARVTKVPLVAEKLLKEPKVVNVVQFEPNKGAIGKAYKKEAKLVMEHLAVCDECYIT
DQEKLLSENGEFTVETEGKTFKLTKDMVSVKRFQKTLHVEEITPNVIEPSFGIGRIMYSI
FEHTFHIRQGDEQRTYFSFPPVVAPYKCSVLPLSQNQEFVPFVRELSEAMTKFGVSHKVD
DSSGSIGRRYARTDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVRELPEIVRD
LANGTTTWSEIENKYPIFEGQETSKKDAAEE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcagagcgacatcagcagtgctgcggagcggagccgagatctcagccgcggtc
gtgttcatcctctcgcggaccaaagccagacctgagccgctgtgtacctcacgcgttatc
agacctttctgtctgacagcttgtttaagcaagaagaagaggaaggggagtgtgtggtcc
gagcagcgcgagggagagaagatggacggcagcatggaggagattctggctccactgaga
caggcggtgaaggagcagggcgatctggtgcggcagatgaaaaccgacggcgctcccgac
gtggacgtctctaaagctgtggccgagctcaaagccaggaagaagatcctggaggcgaag
gagctctcgctgcagtctaaagatgacatcgtggaccgagcgaagatggaggacacgctg
aagagacgcttcttttacgaccaagcgtttgccatctacggaggtgtgagcggtctgtat
gatttcgggccggtcggttgcgccctgaagaacaacatcctgcaggcgtggaggcagcac
ttcatccacgaggagcagatcctggagatcgactgcacgatgctcacacccgagtccgtc
ctcaagacatcggggcacgtggacaagtttgccgactacatggtgaaagacgtcgtaaac
ggagagtgtttccgagccgatcatctcctcaaagctcatcttcagaagctgatgagcgac
aagaagtgcccgcaggagaaaaagagcgaaatggaagaagtcatcactcagatggacaac
tacactcagcaggagctggctgatctgtttgtgaaatacaacgtcaagtcacccagcaca
ggaaatgacctcacgtcgcccatctcgttcaacctgatgttccagacctccatcgggccc
ggaggcaacatgccaggctatctgaggcctgaaactgctcagggaatcttcctcaacttc
aagcgcctgctggagttcaaccagggcaagctgccgttcgctgctgctcagatcgggaac
tcttttagaaacgagatctccccacgctcaggccttatccgtgtccgagagttcaccatg
gctgagatcgagcacttcgtcgacccgaatgagaaggtgcattccaagttctccagcgtt
gccgatctggagatcctgctgtactcgtccaaagctcagaccagcggtcagtcggctaag
atcatgaaactgggggatgcggtggagcagggcgtcatcaacaactccgtccttggctac
ttcatcgggaggatctacctctacctgaccagagtcggtctggcgaaagacaaagtgcgt
ttccgtcagcatatggacaatgagatggctcactacgcctgcgactgctgggacgccgaa
gccaaaacctcctacggctggatcgaaatcgtgggctgcgccgaccgctcctgctacgac
ctcacgtgtcacgcacgggttaccaaggtcccgctggttgcagagaaacttctgaaggaa
cctaaagtcgtcaacgtagtgcagtttgagccgaacaagggagccatcgggaaggcgtac
aagaaggaggcgaagctggtcatggagcacctcgccgtgtgtgacgagtgctacatcacc
gatcaggagaagctcctcagtgagaacggagagttcaccgtcgagactgaaggcaagacc
tttaaacttacaaaagacatggtgagcgtcaagaggttccagaagacgcttcatgttgaa
gagatcacccccaacgtcatcgagccttccttcggcatcggcagaatcatgtactccatt
ttcgagcacacattccacatcagacaaggagacgagcaaagaacgtatttcagcttcccg
cctgtcgtagcaccgtacaaatgctccgtccttcctctgagccagaatcaggaattcgtg
ccttttgtgcgtgagctatctgaagccatgaccaaattcggcgtgtcccataaagtggac
gactcctccggctccatcgggaggcgctacgccaggacagacgagatcggcgtggcgttc
gggatcactatcgatttcgatacggtgaacaagacgccacacacggccactctgagagac
cgcgacagcatgaggcaaatccgagctgaggttcgcgagttacccgagatcgtgcgagac
ctcgccaacggtaccaccacatggtcggagatcgagaacaagtaccccatctttgaaggg
caggagaccagcaagaaggacgcagcagaagagtag
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