Clarias gariepinus (North African catfish): 128513971
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Entry
128513971 CDS
T10780
Symbol
abcb4
Name
(RefSeq) ATP-binding cassette, sub-family B (MDR/TAP), member 4
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128513971 (abcb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgar02000
]
128513971 (abcb4)
04147 Exosome [BR:
cgar04147
]
128513971 (abcb4)
04090 CD molecules [BR:
cgar04090
]
128513971 (abcb4)
Enzymes [BR:
cgar01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
128513971 (abcb4)
Transporters [BR:
cgar02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
128513971 (abcb4)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128513971 (abcb4)
CD molecules [BR:
cgar04090
]
Proteins
128513971 (abcb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Zeta_toxin
RsgA_GTPase
Rad17
AAA_30
G-alpha
PRK
AAA_29
AAA_15
AAA_7
AAA
AAA_19
DUF815
NTPase_1
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
128513971
NCBI-ProteinID:
XP_053343535
LinkDB
All DBs
Position
26:6579125..6595638
Genome browser
AA seq
1230 aa
AA seq
DB search
MDILLMVVGTIMAMGNGAVLPAMVIVFGEMTNSFVDSSILDSLPPNMTLPENFTWQFSNK
TLGEQMTRHAIYYSIMGGIVLFAAYMQVAFWTLAAGRQVKRIRKMFFHSILKQDIGWFDV
NETGQLNTRLADDIFKINEGIADKLGTLIQSLSTFLAGFIIGFIHGWKLTLVIISISPLL
GISAAIITKVMTSFTSREQTAYAKAGAVAEEVLSAVRTVFAFGGQRKELKRYEKNLEDAK
NVGIRKAITVNIAVGFTYFMIYMSYALSFWYGSTLIFAGEYDIGTLLTVFFAVVIGAFGL
GQTSPNIQAFSSARGAAHKVFNIIDHKPSIDSFSDEGYKPDMVKGNIEFKDIHFSYPSRQ
DVKVLNGMNLKISSGQTIALVGSSGCGKSTTVQLIQRFYDPQEGAVSIDGHDIRTLNVRY
LREMIGVVSQEPVLFATTIAENIRYGREDVTQEEIEQATREANAYDFIMKLPDKFETLVG
DRGTQMSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAIVQAALDKVRLGRTTIIV
AHRLSTIRNADIIAGFQNGNIVELGTHDELMEKKGVYQTLVSMQTFQSTEATESSAEEAG
LDEKSPSATSITERTLYRQKSKSFTSSEKGQEDVHRDSVQEEKVPEVSFFKVLSLNKKEW
PYMVVGIFCAIINGGLQPAFAIIFSKIVAVFAETNPDVKREKANLFSLLFAVIGVISFIA
LFLQGFCFGKAGEILTMRLRYRAFKSMMRQDLGWYDDPKNSVGALTTRLATDTAQVQGAT
GLRLATLAQNVANLGTAIIISFVYGWQLTLLILSIVPVMAVAGAIQMKLLGGHAVKDKKE
LEQAGKIATEAIENIRTVVSLTRESKFESLFQQNLIVPYKNAKKKAHIFGFTFSFSQAMI
YFAYAGCFKFGSWLIEQKLMTFEGVFLVISAIIYGAMAMGEANSFTPNYAKAKMSASHTL
MLINRVPDIDNCSEEGEKPDHFDGNVRFRDVKFRYPSRPDVPVLQGLRLRVKKGQTLALV
GSSGCGKSTTIQLLERFYDAFEGTVMLDDCNVKQLNIHWLRSQIGIVSQEPVLFDCSLAE
NIAYGDNSRQATQEEIEQAAKAANIHSFIEGLPQKYQTQAGDKGTQLSGGQKQRIAIARA
ILRNPKLLLLDEATSALDTESEMIVQEALDKAREGRTCIIVAHRLSTIQNADVIAVFQNG
VVVEEGTHKQLLSQQGVYYTLINSQMGYSK
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggacattcttctgatggtggtgggaaccatcatggccatgggcaatggggcagtgctt
cctgctatggtgattgtatttggtgaaatgacgaacagctttgtggacagcagtatttta
gatagtctgcctccaaacatgactttaccggaaaacttcacctggcaattttctaacaaa
acacttggagaacagatgacgaggcatgccatttactacagcatcatgggaggtatagtc
ctttttgcagcctacatgcaagtggccttctggaccctggctgcagggcgacaagtgaag
aggatcagaaagatgttctttcactccatccttaaacaggacatcggttggtttgatgtt
aacgagacaggacagctcaatacacgacttgcagatgacatctttaagataaacgagggc
attgcagacaagctgggcacattaattcagtccttatccacctttttagcgggcttcatc
attggctttatccatggctggaagctcacccttgtcatcatctccataagtcccctgcta
ggaatctcagctgctatcattaccaaggtaatgacatcattcacctcgagggagcagacc
gcatatgcgaaagccggagctgtagctgaagaggtgctttctgccgtcagaactgtcttt
gcctttggagggcaaaggaaggaattaaaaaggtatgagaaaaacctggaagacgccaag
aacgttggcataagaaaagccattacagtaaacatcgctgtgggtttcacatactttatg
atctacatgtcctacgctctgtccttctggtatggtagcacattgatttttgctggagag
tacgacattggaactcttcttacagttttttttgctgttgtcattggagcatttggcctt
ggccagacctctcctaacattcaggcattctctagtgcacgaggggctgctcacaaggtt
tttaacatcattgatcataaacccagcattgacagtttctcagatgaaggctacaaaccc
gacatggtcaaaggaaacattgagttcaaagacattcactttagctacccctcgcggcag
gatgtgaaagttctaaatgggatgaatctaaagatcagcagtggacagactatcgctctt
gtaggtagcagtggttgtggtaaaagtacaacagtccaactgattcagcgtttctatgac
ccccaagaaggagcagtgagtatagatggccatgacattcgcactctgaatgtgcgctat
ctgagagagatgattggcgttgtgagtcaggagcccgtgctttttgccaccacaattgca
gagaatattcgatatggacgtgaggacgtgacgcaggaggagatagagcaggctacacgt
gaggccaacgcatatgatttcatcatgaaacttcctgataaatttgagactctggttgga
gacagaggcactcagatgagtggaggacagaaacagagaattgccatagcccgagctctt
gtgcgcaatcccaagatcctcctgttggatgaggcaacctcagcattagacacagaaagt
gaggcgattgtacaagcagctctggataaggtgagacttggcagaacgaccatcatagtg
gcccatcgtttgtccactatccgcaatgctgacataatcgctggattccagaacgggaat
attgtagagctcggcacacacgatgaactgatggagaaaaagggagtgtaccaaacactg
gtctctatgcagacatttcaaagcacagaagccacagagtcaagtgcagaggaggcaggg
ctggatgagaagagcccctctgccacatctattacagagcgcacactctacaggcagaaa
tccaagagtttcacttcctcagagaaaggccaggaggatgtacacagagattctgtgcag
gaggaaaaggtcccagaagtgtcattcttcaaagtactgagtctgaacaagaaagaatgg
ccctacatggtggtggggattttctgtgcgatcattaatggaggcctgcagcctgctttt
gctatcatcttttccaaaattgttgctgtgtttgctgagacaaatccagacgttaaaagg
gaaaaggcgaatctcttctcattgctgtttgccgtcattggggtgatttccttcatcgca
cttttcttacagggtttctgctttggtaaagctggtgagatactgaccatgagactgagg
taccgagctttcaaatccatgatgagacaggacttaggttggtatgatgatcctaaaaat
agtgtcggagcactgaccaccagactggccacagacactgctcaagtgcagggcgcaaca
gggttaagactggctacattggctcagaatgtggccaaccttggtactgcgatcatcatc
tcgtttgtgtacggctggcagctcaccctcctcatcctctccatcgtgcccgttatggct
gtagcaggggctatccagatgaagttgttaggaggccatgcagtaaaggacaagaaggag
ttagagcaggctggaaagattgctacagaagccatagagaatatccgcacagttgtatca
ctgaccagagagagtaaatttgagagcctttttcagcagaatctgattgtaccgtacaag
aatgccaaaaagaaagcacatatctttggtttcacattctctttctcccaagccatgatc
tactttgcctatgcaggctgcttcaagtttggttcatggctcattgagcagaaacttatg
acgtttgagggggtttttcttgtaatctcagctataatatatggagccatggcaatggga
gaagccaactcctttactccaaactacgccaaggctaagatgtcagcttctcacaccctg
atgctcatcaatcgagtgccggatatcgacaactgctcagaggagggagaaaagccggat
cactttgatggcaacgtgcgctttcgggatgtgaaatttaggtacccatcacgacccgac
gtgcctgtactgcagggcctgcgtctccgggtgaagaaaggtcaaacgctcgctctggtg
ggcagcagcggatgtggcaagagcaccactattcagctgttggagagattttatgatgca
tttgaaggcacagtgatgctagatgattgcaacgtcaaacagctgaacatccactggctg
cgctctcagataggtattgtatcccaagagcccgtgctatttgattgcagcttggccgaa
aacatcgcatatggagataacagcaggcaggccactcaggaggagatcgaacaagctgcc
aaggcggccaatatacactcttttatagaggggctccctcagaaatatcagacccaggca
ggtgataaaggcacacagctgtcaggtggacagaagcagcgtatcgccattgctagagcc
atcctgcgcaaccccaaactgctgctactggacgaagccacatcggctcttgacacagaa
agtgaaatgatcgtacaggaggccttggataaggcacgtgagggtcgtacgtgcatcata
gtggctcaccggttgtccaccatccagaacgcggacgtcatcgccgtgtttcagaacggc
gtggtggtggaggagggcacacacaaacagctcctcagccagcagggggtttactatact
ctcatcaattcacaaatgggttacagcaaatag
DBGET
integrated database retrieval system
