Clarias gariepinus (North African catfish): 128514013
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Entry
128514013 CDS
T10780
Symbol
washc5
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128514013 (washc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128514013 (washc5)
Membrane trafficking [BR:
cgar04131
]
Protein recycling
Others
WASH complex
128514013 (washc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
RSF
DUF3106
Motif
Other DBs
NCBI-GeneID:
128514013
NCBI-ProteinID:
XP_053343606
LinkDB
All DBs
Position
26:complement(6783210..6811500)
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AA seq
1159 aa
AA seq
DB search
MDFLAENNLCGQAILRIVSRGNAIIAELLRLSDFIPTVFRLRDKSDQQKYGDIICDFSYF
KGQDYYENKLEAKPELQDLDEEFRENNIEILSRFYLAFESVHKYIVDLIRYLDDLNEGVY
IQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKIEGEVRERMLVSYYRYSAARSSADS
NLDDICKLLRSTGYSSNPGAKRPNNYPESYFQRVPISSTFISMVIGRLRSDDIYNQVSAY
PLPEHRSTALATQAAMLYVCLYFCPSILHTQQAKMREIVDKYFPDNWVISIYMGITVNLV
EAWEPYKAAKTALNYTLDAANIKEQASRYASSVETLRPQVQQLLKEGFLREEIVLDNIPK
LLNCLRDCNVAIRWLMLHTAESVYDPNNKRLRQIKDQAISDSKYNPKILFQLLLDTAQFE
FTLKEMFKQMLAEKQLKWESYKKEGSERMTELAEVFSGVKPLTRVEKNENLQAWFREISK
QIESLNYEDSTAAGRKTVQLIQALVEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINIK
EEVLITVQIVGDLSYAWQLIDSFTSIMQESIRVSPSMVTKLRATFLKLASALDLPLMRIN
QANSPDLLSVSQFYSGELVAYVRKVLQIIPESMFTSLAKIIKLQIHDIMEVPTRLDKDKL
KDYSQLGARYEVAKLTHAISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVALS
LHKGLIFNPKAKPSELMPKLKEMAATMDGFYRSFEYIQDYVSIYGLKIWQEEVSRIINYN
VEQECNSFLRTKIQDWQSIYQSTHIPIPKYSPVDESATFIGRLCREILRITDPKTTCYID
QLNTWYDMKTHQEVTNNRLFSEIQDTLGTFGLNGLDRLLCFMIVKELQTFLTVLQKIILK
DKAVVDVFKALLTAVNPVKGIVATASKVYANAVAKTQKVWPAYLESIMKVGQMQILRLQI
ANELNYSCKFDSKHLAAALENLNKSLLADIEAHYQDPSLPYPKEDNTLLYEFTAYLEAAG
IHNPLNKIYITTKRLPYFPTVNFLFLIAQLPKLQYTKNQGMTCRRAADPVDWVPLVLGLL
TLLKQFHSRYTEQFLALIGQFIRSIMEQCTSQKIPDMPADVVGALMFLEDYVRYTKLSRK
VVEAHVPSFIFDEFRTVLQ
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggacttcctcgccgagaataacctttgcggccaggccatcctgaggatcgtgtctcgt
ggaaacgccatcatcgctgagctgctgcgcctctccgactttatcccaaccgtgttcagg
ctccgagacaagagcgaccaacagaaatatggagacatcatctgcgacttcagctatttc
aagggtcaggattactacgagaacaagcttgaggccaagccagaacttcaggacctggac
gaggagttccgggaaaacaacatcgaaatattgtctcgcttttatctggcgtttgaaagt
gtccataaatacattgtggacttaataaggtacctggatgaccttaatgaaggtgtctac
attcagcagactctggaaacagtcctgctgaacgaagatggaaaacagctcttgtgtgaa
gctctgtacctgtacggcgtcatgctattggttatcgatcagaaaatagaaggagaagtc
agagagaggatgctggtctcctattacagatacagtgctgctcgatcttcagcagactca
aatctggatgatatctgtaaactcttaagaagcaccggttactccagtaaccctggggca
aaacggcccaataactacccggaaagctacttccagagagtccccatcagctccaccttc
atcagcatggtcatagggcgtctgcgctccgatgacatctataaccaggtctctgcttat
ccactgccggagcaccggagcaccgccctagccacccaagcagccatgctgtatgtctgt
ctgtacttctgtccctccatcttacacacgcagcaggccaagatgagagagattgtggac
aaatactttcctgataactgggtgatcagtatttacatgggcattactgtgaacttagtg
gaggcctgggagccttataaagcagccaagactgcactgaattacaccctggatgcagca
aacatcaaagagcaggcttctcgctacgcctccagcgtggagaccctccggccgcaggtg
cagcagctgctgaaggagggcttcctgagggaggagatcgtcctcgacaacattcccaaa
ctgctgaactgcctgcgtgactgtaacgtcgccatccgctggctgatgctgcacactgca
gagtcagtgtacgatccgaacaacaagagactgcgtcagatcaaagatcaagcgatcagc
gactccaaatacaatcccaagatcttgtttcagcttctcctggacacggctcagttcgaa
ttcacccttaaagaaatgttcaagcagatgttggcagaaaaacagctgaaatgggagagc
tataagaaagaagggtcggaaaggatgacagaactggccgaggtgttttctggagtcaag
cctctcactagagtggagaaaaatgaaaacctgcaggcgtggttcagagagatctctaaa
caaatcgagtctctgaactatgaagactccacagcagccgggaggaagacggtgcagctc
attcaggctctagtagaagtgcaagagttccaccagctggagtcaaacctgcaggtgtgt
cagttcctggccgacacacgcaagttcctgcaccagatgattcgcacaatcaacattaaa
gaggaggttttgatcactgtgcagattgtgggggatttatcctacgcctggcaacttata
gatagtttcacatccatcatgcaggagagtatccgagtcagcccgtccatggtcaccaaa
cttcgagcgacgtttctgaagttggcctcagctttggatcttcccctgatgcgcattaat
caggccaacagccccgacctgctcagcgtgtcacagttctactctggagagctggtggcc
tacgtcagaaaggtcctgcagatcattccagaaagcatgttcacctcgctggctaaaatc
atcaagctgcagatccatgatatcatggaggttcctacacggctggacaaggacaaacta
aaggactattcccagcttggggcacgctacgaggttgccaaactcacccatgccatttcc
atcttcactgaaggaattctgatgatgaaaacgacacttgtcggaatcattaaggtggat
cccaagcagctgctggaggatggaataaggaaggagcttgttaaacgagttgctctttct
ctacacaaaggcctcatcttcaaccccaaagctaaaccgagcgagctaatgcccaaactg
aaggaaatggctgccaccatggacggcttctatcgctctttcgagtacatccaggactac
gtcagcatctacggcctgaagatctggcaggaggaggtttcccggatcatcaactacaac
gtggagcaggagtgcaacagctttctcagaaccaagatccaagactggcagagcatctac
caatcaacacacattcccattcccaaatactcaccggtggacgagtcggccactttcatt
ggccgtctctgcagggagatcctgaggatcactgatccaaagacaacgtgttatatagat
cagttgaacacctggtatgacatgaagacccaccaggaagtgactaataacaggctgttc
tcagagatccaggacactctgggcacattcggcctgaacggactcgaccgtctgctgtgc
tttatgatcgtcaaggagctacagactttcctgactgtacttcagaagatcatcctcaag
gacaaagctgtggtcgatgtttttaaagctttgctgaccgctgtgaacccggtgaaaggc
attgtggcaacagcaagcaaagtgtacgctaacgctgtagccaaaacacagaaagtctgg
cctgcatatctggagtccattatgaaggtgggtcagatgcagatcctgaggctgcagata
gcaaatgagttaaactattcatgtaagtttgactccaaacatctcgcagcggctctggaa
aatctaaacaaatctcttctcgctgatattgaagcccactaccaggacccgagcctgccg
taccctaaagaggacaacaccctgctttatgagttcactgcctatctggaagcagctgga
atacacaaccctctgaacaaaatctacatcaccaccaagcgcctgccgtacttccctaca
gtcaacttcctcttcctcatcgctcagctgcctaaactccagtacactaaaaaccaagga
atgacgtgccggagagcggctgatccagtagactgggttcctctcgtcctgggtttactc
acgctgctgaaacagtttcactccagatacactgagcagttcctggctctcattggccag
tttattcgctccatcatggagcagtgcaccagtcaaaagatccctgacatgccggctgat
gtagtaggagcgctgatgtttttggaagactacgtccgctatacaaagctatccagaaag
gtggtggaagctcatgtcccaagtttcatctttgacgagtttagaacagtgttgcaataa
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