Clarias gariepinus (North African catfish): 128514027
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Entry
128514027 CDS
T10780
Symbol
gdf9
Name
(RefSeq) growth/differentiation factor 9
KO
K22673
growth differentiation factor 9
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128514027 (gdf9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cgar04052
]
128514027 (gdf9)
Cytokines and neuropeptides [BR:
cgar04052
]
Cytokines
Transforming growth factors (RSTK binding)
128514027 (gdf9)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
Porin_6
Motif
Other DBs
NCBI-GeneID:
128514027
NCBI-ProteinID:
XP_053343639
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All DBs
Position
2:12853954..12858209
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AA seq
427 aa
AA seq
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MVKQTCAVFHLNALVLVMMCAGVSGLSGHGAAAQPAEHLAHHGNILSPLLKALSEHEPWG
THFPRTKPDSRYVRFMKRLYKLSAKHERSHEASHLYNTVRLITARQECLDQCGEFLMQDI
SYSLTRVRAQEQLLKSVLLYSLDHNHAASLTSHCYLYMKEQTPSDERMCLNTPSSQHSVS
PISFHFRLNRASHHKWVEVDVTPFLHPLIQGHKKDIHLLINLTCLDNEPGHHTSKSLVEL
THMAPSLLLYLNDTSEVAYQRGSTHTRLGEIRSNHWGENMQSQYYRSSIHMLKWRDRRSA
PNTIQPLKSSTESGPLSQFEHSTDDCDLYDFRVSFSQLRLDHWIIAPSKYNPRYCKGICP
RVVGHTYGSPVHTMVQNIIYEKLDSSVPRPSCVPSEYDPLSVLTIENDGSIAYKEYEEMI
ATKCTCR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggttaagcagacgtgtgccgtttttcacctgaacgcgctcgtgctcgtgatgatgtgc
gccggggtgtcgggactctcgggccacggagcggcagctcaacccgccgagcacttagcg
catcacggcaacattttaagcccgttactgaaagccttatcggagcacgagccgtggggg
acacatttcccgagaaccaaacccgattcgagatacgtccgattcatgaaaaggctttac
aaactgtctgcgaagcacgagaggagccacgaggcgtcccacctttacaacacggtgcgg
ctgatcacagcgaggcaggagtgtctggatcagtgtggagagtttttaatgcaggacatt
tcctacagtctgacccgcgtacgagcccaggaacagctgctaaaatcggttttgctctac
tccttggaccacaaccatgcagcctcactcacctctcactgctacctgtacatgaaggaa
caaacaccatctgacgagcgcatgtgtctcaacactcctagttcacagcactctgtctca
cctatcagtttccacttccgactcaacagagccagccaccacaaatgggtggaggtggat
gtgacccccttcctccaccctctcatccagggtcacaaaaaggacatccacctactaatc
aacctcacctgcctggataacgaaccaggacatcacacttccaaaagccttgtggagctc
acacacatggcaccatctctactgctctacctaaatgacaccagcgaggtggcctatcag
agaggttccacacacaccaggctgggggaaatccgatcaaaccattggggtgagaatatg
cagagccagtattacagatctagtatccatatgttgaagtggagagatcgaaggagtgct
ccaaacacaattcagcccttaaagtcgagcactgaaagtggaccactgtcccaattcgaa
cactccacagatgactgtgacctctatgacttccgcgtgagcttctctcagctcagacta
gatcactggatcatagcgccgtccaagtacaaccccaggtactgcaaaggcatctgtcct
cgagttgtgggtcatacctatggctcgccagtgcacacaatggtacagaacattatttat
gagaagctggactcctccgtgcccagaccttcttgtgttccatctgaatatgaccctcta
agtgttttgaccattgaaaatgatggttctattgcatataaagaatatgaagaaatgatt
gctacgaagtgtacctgtcgttaa
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