Clarias gariepinus (North African catfish): 128514039
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Entry
128514039 CDS
T10780
Symbol
ncoa2
Name
(RefSeq) nuclear receptor coactivator 2
KO
K11255
nuclear receptor coactivator 2
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128514039 (ncoa2)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
128514039 (ncoa2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NCOA
PAS_11
Nuc_rec_co-act
SRC-1
NCOA_u2
DUF1518
DUF4927
PAS_3
PAS
PAS_9
Per3-like_PAS-A
HLH
Motif
Other DBs
NCBI-GeneID:
128514039
NCBI-ProteinID:
XP_053343655
LinkDB
All DBs
Position
26:complement(17977826..18046277)
Genome browser
AA seq
1281 aa
AA seq
DB search
MSGIGENSSDPGRVESQKRKDCSSELLGPSPKRITEKRNREQENKYIEELAELIFANIND
IDNFNVKPDKCAILKETVKQIRQIKEQEKATVCSEDEVQKADVSSTGQSVIDKDALGPMM
LEALDGFFFVVNMEGNIVFVSENVSQYLRYNQEELMNTSVYSILHVGDHAEFIKNLLPKS
LVNGVAWSSEGSRRNSHSFTCRMLVNPEEAQEQEAQKYETMQCFTVSEPKSIKEEGEDLQ
SCLICVARRVPMKERPMLPTHESFTTRQDLQGKITSLDTTMLRASMKPGWEDLVRRCIQR
FHLQNEGDSSYAKRHQQEVLRHGQAFSPTYRFSLSDGTIVSAYTKSKLVRSPATNEPQLY
MSLHVLQREPTVCGMPPDLAKPMTPLTTMTSPNPMSGNAQGQEGIISSNTPAFSSPGTHK
DFRFGCPGNPQGTGYPLKMSSPSHRPSLGVTSAPRLPPSQFNPTNSLHSPAGMCPGNSGT
QVFTSSSLNALQALSECQSISLSQSLGSPDSKKLESPASVSQALPKLEPFGESEQSDGHE
NDSSGQRDEKGNLGQFNSSDESKIHESKGHTKLLQLLTTKNENMDSSSSPSPAPEKELMT
GHQPGTSGTSATSLKEKHKILHRLLQNSTSPVDLAKITAEATGKDASHDGTNVSDIGKQE
AASPKKKDNALLRYLLDNDENTIKDKGIKMEPGEIKVEGNSMVTVKKEKPDGGYEQAEQS
SELDDILDDLQNSQPNFFSDARPMSLPAAVDKQAIINDILQITGESGVQPRAVQNFSGPR
PLGRVPPMRSVSLDMNASTKGSPGQYPIMRNTTPYSLIQQQQQQQGMMGNQGILTNQANM
ADVWASQGVSSSSPQGALQGRMVQNANMPIRPSSQPGARPMLPNQMMPGAQSLEVDMGLA
GPTFPQQQAPPNQTAPPNQTAPWPDSMMPIEQVAFGDPNRSLYGAPQEDVLCAAEGPADE
GALLNQLYTALKDFDGLEEIDRALGIPALVGQAPSLEAEMFPGQDQSLLMDQKPIYTQQQ
YPAPLSHNTPGGFAPMQDAGYHGIGLVGGQRPGFPMIRMQPRPGLRPPGSVPNQPNALRL
QLQHRLQAQQNRQPMMNQMTGVSNMNLPLRPNVPNQGTINAQMLAQRQRELLSNHLRQKQ
RSMSMRPQGLNVPPNMAASTMGGTQIAHANPTHFPYTPNYGITQQPDSGFGGAATPQSPL
VSPRMGHPQSPMMQQGNATFQSSPEMNGWTQGNINANSMYTQQASGSVYNSNGMSMNVPM
TPNTNSMSSMGQMGTEQPKYC
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcataggggaaaactcatccgaccctggtagggtcgagtctcagaaacgcaaa
gactgctcatcagagctcctggggcccagccctaagcgaatcacagagaaacgaaaccgc
gagcaggagaataaatacattgaggaactcgccgagctgattttcgccaacatcaacgac
atcgataacttcaatgtcaagcctgacaaatgtgcaatcctgaaagaaactgtgaaacag
atccgtcaaataaaagagcaagagaaagcgactgtgtgcagtgaggacgaggtgcagaag
gccgacgtctcgtccacaggccaaagtgttattgacaaagatgccctcggaccaatgatg
ctggaggccttggatggcttcttctttgtagtgaacatggaggggaacattgtgtttgtg
tcagaaaatgtgtcgcagtacctgcgctacaaccaggaggagcttatgaacacaagtgtt
tacagcattttacatgtcggagaccacgcagagtttattaagaacctgctgcctaaatca
ctcgtgaatggcgtggcatggtcgagcgagggctccaggaggaacagtcactcgtttaca
tgccgcatgctggtgaacccggaggaggcgcaggagcaggaggcacagaaatacgaaacc
atgcagtgtttcactgtgtcggaacccaaatccattaaagaggagggagaggatctgcag
tcgtgtctgatctgtgtagcgaggagagtacctatgaaggagcgaccgatgctccccaca
cacgagagcttcactacacggcaagatctccaaggaaagatcacgtcattagacaccact
atgttacgagcctctatgaagcccggatgggaagacttagtaaggagatgcatccaacgc
tttcacctgcagaacgaaggagatagttcttacgccaaacgtcaccagcaagaagtatta
agacatggccaagcgttcagccccacctatcgcttctccctttccgatggcaccatcgtt
tcggcttacaccaaaagcaaactcgtccgctctccagccaccaacgagccacagctttac
atgtcgctgcacgtcctccagagagagccaaccgtatgtggcatgccacctgacctggcc
aaacccatgaccccactgaccacaatgacttccccgaatccaatgagcgggaatgctcag
ggtcaggagggcatcattagcagcaacacaccagccttctcgtccccaggaactcataaa
gatttccgttttggctgcccaggcaaccctcagggcactggatacccgctaaaaatgagc
agcccatcacatcgtcccagtcttggggtaaccagcgccccacgtttacccccatcccag
tttaaccccaccaattccctccattcgcccgcaggtatgtgcccgggcaacagtggtact
caagtgttcactagcagttctctgaatgcccttcaagctcttagcgagtgccaatccata
agcctgagccagtctctggggtcacctgattccaaaaaattagaatcaccagcctcagtt
tctcaagctttgcccaagctagagccatttggggaatctgagcaaagcgacgggcatgaa
aacgacagcagcgggcaaagggacgagaaaggcaacctgggtcagttcaacagctcagat
gaaagtaagatccacgaaagcaaagggcacacaaagctcctccagcttctcaccactaaa
aacgaaaacatggactcgtcctcctcgccatcgcctgcgccagaaaaagaacttatgacc
gggcatcagcctggtacatcaggaacgagcgctacgtccttaaaggagaagcacaagatc
ctgcaccggctcttgcagaacagcacgtcgccggtggacttggcaaagatcacggccgag
gcgacggggaaagacgccagccacgacggaaccaacgtttccgacatcggcaaacaggag
gcggcgagtccgaaaaaaaaggacaacgcgctgttgcggtacctgttggacaatgacgag
aacacgattaaggacaaggggataaagatggagccgggagagattaaggtggaggggaat
agcatggtcactgtaaagaaggagaaaccggatggaggatatgaacaggcagagcagtcc
agcgagctggacgatatcctggacgacctgcagaacagtcagccgaatttcttctccgac
gctcgtcccatgtctctgccagctgccgtcgataagcaggcgatcatcaacgacattctg
cagatcacaggagagagcggtgtacagccgcgagcagtacagaatttcagtggcccgagg
cctctaggccgggttcctcccatgcgaagcgtgtctctggacatgaacgcctcgactaaa
gggtcgccgggtcagtatcccatcatgaggaacaccactccatattcactcattcagcag
caacagcagcagcaaggcatgatgggaaaccagggcatcttgaccaaccaggccaacatg
gcagatgtttgggcatctcagggcgtgagcagttcctcccctcaaggggcgctgcaggga
cgcatggtgcagaatgccaacatgccgatcagacccagcagccaaccaggagccaggcca
atgctgccgaatcagatgatgcccggcgcccagtctttggaagtggacatgggtctggca
ggccctacgtttccacagcagcaggctccgcccaatcagaccgctccgcccaatcagaca
gctccgtggcctgacagtatgatgcccattgagcaggtggcatttggagatcctaacagg
tccttgtatggtgcaccacaggaagatgtgctgtgtgcagctgaaggacctgctgatgaa
ggtgctttacttaatcagctctacactgccctcaaagactttgatggtctggaggagatt
gatcgagctctgggcattccagcactcgtgggacaggctccatcattagaagctgaaatg
ttcccaggtcaggatcaaagcctgttaatggaccagaagcctatttacactcaacagcag
taccctgcgccactgtcccataacacaccaggaggcttcgctcctatgcaggacgctggt
taccatggcattggcctagttggagggcaaaggccaggatttcccatgatccgcatgcag
cccagaccaggtctccggccaccggggagcgtcccaaatcaacctaacgcgctcaggctg
cagctgcagcacagactacaagcacagcagaatcgccagcctatgatgaatcagatgact
ggagtgtcaaacatgaacctacctctaagacccaatgttccgaatcaggggaccattaac
gctcagatgcttgcacagcgtcagagggagctgcttagtaatcatctgcgtcagaagcag
cgcagcatgagcatgcgacctcagggcctcaacgtgccaccaaatatggctgccagcact
atgggcggcacccagatcgcccatgccaaccctacacacttcccctacacgcccaactat
ggaataactcagcagcctgactccgggttcggtggtgcagcgacccctcagagccccctc
gtttcccctagaatgggtcacccccaaagccccatgatgcaacagggtaatgccacattt
cagtcgtctccggagatgaacggctggacgcagggcaacataaatgccaacagcatgtac
actcagcaggccagcggcagtgtgtataacagtaacggcatgagcatgaatgtgcccatg
actcccaacaccaacagcatgagcagcatgggccagatgggcacagagcagccgaagtat
tgttga
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