Clarias gariepinus (North African catfish): 128514095
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Entry
128514095 CDS
T10780
Symbol
pabpn1
Name
(RefSeq) polyadenylate-binding protein 2 isoform X1
KO
K14396
polyadenylate-binding protein 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128514095 (pabpn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128514095 (pabpn1)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128514095 (pabpn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
128514095
NCBI-ProteinID:
XP_053343753
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All DBs
Position
26:17911313..17922236
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AA seq
279 aa
AA seq
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MAEFGNGLAEESLLDSDPGHPELEDPGVGDEEPGLDEGEAAIEDPELEAIKARVREMEEE
AEKLKELQNEVEKQMNLSPPPAGPVIMSIEEKIEADGRSIYVGNVDYGATAEELEAHFHG
CGSVNRVTILCDKFTGHPKGFAYIEFADKESVRTAMALDESLFRGRQIKVGAKRTNRPGI
STTDRGFPRARFRSRGGSFSSRARYYSGYTPPRGRGRAFRFQDQWRLSTPPPPVAAAPPT
VSPSSLSLSAPSIPLSTLMWGGGGGAQGDPRPIYYNNKR
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggcggagttcggtaacggactagcggaggaatctctgctcgactcagaccctggtcat
cctgagctggaagatccgggtgtcggggacgaagaaccgggtttagacgagggagaggcg
gcgatcgaagacccggagctggaggccattaaagcccgggtgagagagatggaggaggaa
gcagagaaactgaaggagctccagaacgaagtggagaaacagatgaaccttagtcctcct
cccgctggtcctgtcatcatgtccattgaagagaagatagaagcagatggaagatcaatt
tatgttggaaatgtggattacggagcaacagcagaggagctcgaagctcattttcatggc
tgtggctctgttaatagagtcactatcttgtgtgacaaattcacaggacacccgaaaggg
tttgcatatatcgaatttgcagacaaggaatcggtaagaacagcaatggcactggatgag
tccttattccgaggaaggcagataaaggtcggagcaaagagaacgaatcgacccggcatc
agcaccacagaccgcgggtttcctcgggcccggttccgctcacgtggaggaagtttctcg
tctcgggctcggtattacagcggatacacaccacccagaggaagaggacgggccttcagg
tttcaggaccagtggaggctgagtactcctcctccccctgtggctgcagcgccccctaca
gtctcaccatcgtctctttctctctctgctccctctatccctctatccacactcatgtgg
gggggcgggggtggggcacagggtgaccctcggcccatttactacaacaacaaacgttaa
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