Clarias gariepinus (North African catfish): 128514107
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Entry
128514107 CDS
T10780
Symbol
pld1b
Name
(RefSeq) phospholipase D1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00564
Glycerophospholipid metabolism
cgar00565
Ether lipid metabolism
cgar01100
Metabolic pathways
cgar04144
Endocytosis
cgar04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
128514107 (pld1b)
00565 Ether lipid metabolism
128514107 (pld1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128514107 (pld1b)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
128514107 (pld1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128514107 (pld1b)
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
128514107 (pld1b)
Membrane trafficking [BR:
cgar04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
128514107 (pld1b)
Endosome - Golgi transport
Others
Others
128514107 (pld1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PX
PH
Motif
Other DBs
NCBI-GeneID:
128514107
NCBI-ProteinID:
XP_053343773
LinkDB
All DBs
Position
26:25118176..25157761
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AA seq
1038 aa
AA seq
DB search
MAQPGSVTTSTLHLVANDMTDIMENLDTRELDIGDGEDEFEGPGAQSAGTRVPFSLIYKT
VGVKEQDPRVFLTSSPITAKILEVERFACAQDRFNITNQRSVSKKLPAVFRIEMKHGNFT
WIVKRKEKHFMELHRELRTYKTFLKIPLPTRTHTERRQTVRQTRQMPSLPRGGGDELARE
EQVSSRRRQLEDYLNKLLKMPLYRNYHATMEFIDVSQLSFIHDLGPKGLEGMVHKRSGGH
RIPGLNCCGRSKVCYRWSKRWLVVKDSFLLYMKPDSGAISFVLLVDKEFCVKMDSKDTDT
KHGVRVDSLCRNLILKFSSYRHVRWWGQAIDDFVREYGAAFLQDHRFGSFASVQENISSK
WYVNGKTYMEDVANALEEAEEEIFITDWWLSPEIFLKRPVVEGNRWRLDCILKRKAQKGV
RIFVLLYKEVELALGINSEYSKRTLLQLHPNIKVMRHPDHVSSTVYLWAHHEKIVVIDQS
VAFVGGIDLAYGRWDDREHRLTDVGSVTRALNTSAENVPEASLSMAPPSNGAVQSNGKNS
SRDSEDQPKLKGYGKRRRSRFSIRKRLQRHGLVHADSVSSNESSEENTDQAPPLQADVIG
LMGNTRFWHGKDYCNFVHKDWIQLDKPFDDFIDRHITPRMPWHDIASVVHGKAARDVARH
FIQRWNFTKIMKPKYRSLSYPYLLPKSHATAGEIRHSVPGCVPTRVQVLRSASDWSAGIK
HHEESIHNAYVQVIENSKHYIYIENQFFISCADNKLVYNRIGDALTQRIIKAYREGARYR
VYVVTPLLPGFEGDINTGGGSALQAIMHFNYRTMIRGDHSIVSQLKKEMGDNWMNYISFG
GLRTHAELEGKLVTELIYVHSKMLIADDNTVIIGSANINDRSMLGKRDSEVAVIYEDTET
ETSVMDGQEYQAGRFGLRLRLECFRTILGSNTDSSIDVSDPVSDHFYKDVWLTTASRNAS
IYQKVFRCLPSSDVRMISELEVYLSKPGLDKEDPLKAQEELKKVRGFLVQFPLYFLCEQN
LLPPIGSKEAMVPMEVWT
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagccgggctccgtcacaaccagcacactgcacctggtggccaatgacatgacc
gacatcatggagaacctcgacacgcgcgagctggacatcggagacggcgaggacgagttt
gaaggtcccggcgctcagagtgcaggaactcgtgtcccgttctcgctcatctacaagacg
gtgggggttaaagaacaggatcctcgagtcttcctcacatcgtcccccatcactgccaaa
atcctggaggtggagcgcttcgcctgtgctcaggaccgcttcaacatcaccaaccagagg
agtgtgtcgaagaaacttcctgcagttttcaggatcgagatgaaacacggaaacttcacc
tggatcgtgaagaggaaggagaagcacttcatggagcttcacagagagctacgcacctac
aaaacattcctgaagattccactaccgactcgcactcacacggagcggagacagacggtc
agacagacacgtcagatgcccagtttaccgcgcggcggaggagacgagctcgcccgagag
gagcaggtgtccagccggaggcgccagttagaggattatttaaacaagctgctaaagatg
ccgctgtacaggaactaccacgccaccatggagttcattgacgtgagtcagctctcgttt
atccacgatttgggaccaaaaggcttagaaggcatggtccacaagaggtcaggaggtcac
cgcatccccgggctcaactgctgcggccgcagtaaagtgtgttaccgctggtccaaacgg
tggctggtggtgaaagactcgttcctgctctacatgaagcccgactccggcgcgatctcc
ttcgtcctcctggtggataaagagttctgtgtgaaaatggactctaaagacacggacacg
aaacacggcgtgcgtgtggacagtctgtgcaggaacctgattctgaagttctccagttac
cgccacgtgcgctggtgggggcaggccatcgacgacttcgtgcgcgagtacggcgccgcc
ttcctgcaggaccatcgctttggttccttcgccagcgtgcaggagaacatctcctccaaa
tggtacgtgaacggtaaaacctacatggaggacgtggctaatgcgctggaggaagctgag
gaggagatcttcatcacagactggtggctcagccccgagatcttcctcaaacggccggtc
gtcgaaggaaatcgctggcgtctggactgcattctgaagcgcaaagcccaaaaaggagtt
cggatatttgtcctgctctataaggaggtggagctcgcgctcgggatcaacagtgaatac
agcaagaggacgctgctgcagcttcaccccaacatcaaggtgatgcgacatcctgaccac
gtctcctccaccgtctatctctgggctcatcacgagaagatcgtggtgatcgaccaatcg
gtggcctttgtgggcgggatcgatctggcgtacgggcgctgggacgaccgcgagcaccgt
ctgacggatgtggggagcgtgaccagagccctcaacacgtctgcagagaatgttccggaa
gcgtctctgtccatggctcctccctctaacggcgccgtacagagtaacgggaaaaactcc
agcagggattcggaggatcagcccaaactcaaaggctacgggaaaaggaggaggagtcgc
ttcagcatcaggaaacgtctgcagagacacgggctggtccacgccgacagtgtgagcagc
aacgagagctccgaggagaacacagatcaggctccgcccctgcaggctgatgtcatcggg
ctgatggggaacacgcgcttctggcacgggaaggattactgtaactttgtgcacaaggac
tggatccagctggacaaaccgttcgatgatttcatcgacagacacatcactcccagaatg
ccctggcacgacatcgcctcagtggttcatgggaaagctgcgagagacgtcgcgcggcac
tttattcagcgctggaatttcaccaagatcatgaagccgaagtaccgctccctctcgtac
ccgtacctcctccccaaatcccacgccaccgctggtgagatccgacactcggtcccgggc
tgcgttcccaccagagttcaggtgttgcgctcagcgtcagactggtcggcgggtataaag
caccatgaagagtcgatccacaacgcctacgtgcaggtgatcgagaacagcaagcactac
atctacatcgagaaccagttcttcataagctgcgctgataacaagctcgtgtacaaccgg
atcggcgacgccctcacgcagaggatcatcaaagcctacagggagggtgcaaggtaccgt
gtgtatgtggtcactcctctcttaccggggttcgagggagacatcaacaccggagggggc
agcgccctgcaggccatcatgcacttcaactacaggacgatgatcagaggagatcactcc
atcgtgtcccagctgaagaaagagatgggagataattggatgaactacatctcgttcggg
ggactgaggactcacgcagaactggaggggaaactggtgacggagctgatttacgtccac
agcaaaatgctgatcgcagacgacaacaccgtcatcatcggttcagcaaacattaatgac
cgcagtatgttgggaaagcgtgacagtgaagtggctgttatttacgaggacacagagaca
gagacatcggtgatggatggacaggaatatcaggcaggacgtttcggactgcggctgcgt
ctggagtgttttaggacgatcctcggctctaacaccgactccagcatcgacgtctcggac
cccgtcagtgatcatttctacaaggatgtgtggctgaccactgcgtcccgcaacgcctcc
atctaccagaaggtgttccgctgcttgccgtcgagcgacgtgaggatgatctcggagctg
gaagtgtatctgtccaagcctgggctggataaagaagatcctctgaaagctcaggaggaa
ctcaagaaggtccgaggcttcctggtccagttcccgctctacttcctgtgtgagcagaac
cttctccctcccatcggttctaaagaggccatggtacccatggaggtgtggacctga
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