Clarias gariepinus (North African catfish): 128514107
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Entry
128514107 CDS
T10780
Symbol
pld1b
Name
(RefSeq) phospholipase D1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00564
Glycerophospholipid metabolism
cgar00565
Ether lipid metabolism
cgar01100
Metabolic pathways
cgar04144
Endocytosis
cgar04912
GnRH signaling pathway
Brite
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
128514107 (pld1b)
Membrane trafficking [BR:
cgar04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
128514107 (pld1b)
Endosome - Golgi transport
Others
Others
128514107 (pld1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128514107
NCBI-ProteinID:
XP_053343773
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Position
26:25118176..25157761
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AA seq
1038 aa
AA seq
DB search
MAQPGSVTTSTLHLVANDMTDIMENLDTRELDIGDGEDEFEGPGAQSAGTRVPFSLIYKT
VGVKEQDPRVFLTSSPITAKILEVERFACAQDRFNITNQRSVSKKLPAVFRIEMKHGNFT
WIVKRKEKHFMELHRELRTYKTFLKIPLPTRTHTERRQTVRQTRQMPSLPRGGGDELARE
EQVSSRRRQLEDYLNKLLKMPLYRNYHATMEFIDVSQLSFIHDLGPKGLEGMVHKRSGGH
RIPGLNCCGRSKVCYRWSKRWLVVKDSFLLYMKPDSGAISFVLLVDKEFCVKMDSKDTDT
KHGVRVDSLCRNLILKFSSYRHVRWWGQAIDDFVREYGAAFLQDHRFGSFASVQENISSK
WYVNGKTYMEDVANALEEAEEEIFITDWWLSPEIFLKRPVVEGNRWRLDCILKRKAQKGV
RIFVLLYKEVELALGINSEYSKRTLLQLHPNIKVMRHPDHVSSTVYLWAHHEKIVVIDQS
VAFVGGIDLAYGRWDDREHRLTDVGSVTRALNTSAENVPEASLSMAPPSNGAVQSNGKNS
SRDSEDQPKLKGYGKRRRSRFSIRKRLQRHGLVHADSVSSNESSEENTDQAPPLQADVIG
LMGNTRFWHGKDYCNFVHKDWIQLDKPFDDFIDRHITPRMPWHDIASVVHGKAARDVARH
FIQRWNFTKIMKPKYRSLSYPYLLPKSHATAGEIRHSVPGCVPTRVQVLRSASDWSAGIK
HHEESIHNAYVQVIENSKHYIYIENQFFISCADNKLVYNRIGDALTQRIIKAYREGARYR
VYVVTPLLPGFEGDINTGGGSALQAIMHFNYRTMIRGDHSIVSQLKKEMGDNWMNYISFG
GLRTHAELEGKLVTELIYVHSKMLIADDNTVIIGSANINDRSMLGKRDSEVAVIYEDTET
ETSVMDGQEYQAGRFGLRLRLECFRTILGSNTDSSIDVSDPVSDHFYKDVWLTTASRNAS
IYQKVFRCLPSSDVRMISELEVYLSKPGLDKEDPLKAQEELKKVRGFLVQFPLYFLCEQN
LLPPIGSKEAMVPMEVWT
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagccgggctccgtcacaaccagcacactgcacctggtggccaatgacatgacc
gacatcatggagaacctcgacacgcgcgagctggacatcggagacggcgaggacgagttt
gaaggtcccggcgctcagagtgcaggaactcgtgtcccgttctcgctcatctacaagacg
gtgggggttaaagaacaggatcctcgagtcttcctcacatcgtcccccatcactgccaaa
atcctggaggtggagcgcttcgcctgtgctcaggaccgcttcaacatcaccaaccagagg
agtgtgtcgaagaaacttcctgcagttttcaggatcgagatgaaacacggaaacttcacc
tggatcgtgaagaggaaggagaagcacttcatggagcttcacagagagctacgcacctac
aaaacattcctgaagattccactaccgactcgcactcacacggagcggagacagacggtc
agacagacacgtcagatgcccagtttaccgcgcggcggaggagacgagctcgcccgagag
gagcaggtgtccagccggaggcgccagttagaggattatttaaacaagctgctaaagatg
ccgctgtacaggaactaccacgccaccatggagttcattgacgtgagtcagctctcgttt
atccacgatttgggaccaaaaggcttagaaggcatggtccacaagaggtcaggaggtcac
cgcatccccgggctcaactgctgcggccgcagtaaagtgtgttaccgctggtccaaacgg
tggctggtggtgaaagactcgttcctgctctacatgaagcccgactccggcgcgatctcc
ttcgtcctcctggtggataaagagttctgtgtgaaaatggactctaaagacacggacacg
aaacacggcgtgcgtgtggacagtctgtgcaggaacctgattctgaagttctccagttac
cgccacgtgcgctggtgggggcaggccatcgacgacttcgtgcgcgagtacggcgccgcc
ttcctgcaggaccatcgctttggttccttcgccagcgtgcaggagaacatctcctccaaa
tggtacgtgaacggtaaaacctacatggaggacgtggctaatgcgctggaggaagctgag
gaggagatcttcatcacagactggtggctcagccccgagatcttcctcaaacggccggtc
gtcgaaggaaatcgctggcgtctggactgcattctgaagcgcaaagcccaaaaaggagtt
cggatatttgtcctgctctataaggaggtggagctcgcgctcgggatcaacagtgaatac
agcaagaggacgctgctgcagcttcaccccaacatcaaggtgatgcgacatcctgaccac
gtctcctccaccgtctatctctgggctcatcacgagaagatcgtggtgatcgaccaatcg
gtggcctttgtgggcgggatcgatctggcgtacgggcgctgggacgaccgcgagcaccgt
ctgacggatgtggggagcgtgaccagagccctcaacacgtctgcagagaatgttccggaa
gcgtctctgtccatggctcctccctctaacggcgccgtacagagtaacgggaaaaactcc
agcagggattcggaggatcagcccaaactcaaaggctacgggaaaaggaggaggagtcgc
ttcagcatcaggaaacgtctgcagagacacgggctggtccacgccgacagtgtgagcagc
aacgagagctccgaggagaacacagatcaggctccgcccctgcaggctgatgtcatcggg
ctgatggggaacacgcgcttctggcacgggaaggattactgtaactttgtgcacaaggac
tggatccagctggacaaaccgttcgatgatttcatcgacagacacatcactcccagaatg
ccctggcacgacatcgcctcagtggttcatgggaaagctgcgagagacgtcgcgcggcac
tttattcagcgctggaatttcaccaagatcatgaagccgaagtaccgctccctctcgtac
ccgtacctcctccccaaatcccacgccaccgctggtgagatccgacactcggtcccgggc
tgcgttcccaccagagttcaggtgttgcgctcagcgtcagactggtcggcgggtataaag
caccatgaagagtcgatccacaacgcctacgtgcaggtgatcgagaacagcaagcactac
atctacatcgagaaccagttcttcataagctgcgctgataacaagctcgtgtacaaccgg
atcggcgacgccctcacgcagaggatcatcaaagcctacagggagggtgcaaggtaccgt
gtgtatgtggtcactcctctcttaccggggttcgagggagacatcaacaccggagggggc
agcgccctgcaggccatcatgcacttcaactacaggacgatgatcagaggagatcactcc
atcgtgtcccagctgaagaaagagatgggagataattggatgaactacatctcgttcggg
ggactgaggactcacgcagaactggaggggaaactggtgacggagctgatttacgtccac
agcaaaatgctgatcgcagacgacaacaccgtcatcatcggttcagcaaacattaatgac
cgcagtatgttgggaaagcgtgacagtgaagtggctgttatttacgaggacacagagaca
gagacatcggtgatggatggacaggaatatcaggcaggacgtttcggactgcggctgcgt
ctggagtgttttaggacgatcctcggctctaacaccgactccagcatcgacgtctcggac
cccgtcagtgatcatttctacaaggatgtgtggctgaccactgcgtcccgcaacgcctcc
atctaccagaaggtgttccgctgcttgccgtcgagcgacgtgaggatgatctcggagctg
gaagtgtatctgtccaagcctgggctggataaagaagatcctctgaaagctcaggaggaa
ctcaagaaggtccgaggcttcctggtccagttcccgctctacttcctgtgtgagcagaac
cttctccctcccatcggttctaaagaggccatggtacccatggaggtgtggacctga
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