KEGG T10780: 128514131

Clarias gariepinus (North African catfish): 128514131

Entry

128514131         CDS       T10780

Symbol

rab5ab

Name

(RefSeq) RAB5A, member RAS oncogene family, b

K07887

Ras-related protein Rab-5A

Organism

cgar Clarias gariepinus (North African catfish)

Pathway

cgar04137

Mitophagy - animal

cgar04144

Endocytosis

cgar04145

Phagosome

cgar04148

Efferocytosis

cgar05132

Salmonella infection

Brite

KEGG Orthology (KO) [BR:cgar00001]
09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    128514131 (rab5ab)
   04145 Phagosome
    128514131 (rab5ab)
   04137 Mitophagy - animal
    128514131 (rab5ab)
   04148 Efferocytosis
    128514131 (rab5ab)
09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128514131 (rab5ab)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgar04131]
    128514131 (rab5ab)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgar04147]
    128514131 (rab5ab)
   04031 GTP-binding proteins [BR:cgar04031]
    128514131 (rab5ab)
Membrane trafficking [BR:cgar04131]
Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    128514131 (rab5ab)
Endosome - Lysosome transport
    128514131 (rab5ab)
Exosome [BR:cgar04147]
Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128514131 (rab5ab)
  Exosomal proteins of other body fluids (saliva and urine)
   128514131 (rab5ab)
  Exosomal proteins of colorectal cancer cells
   128514131 (rab5ab)
  Exosomal proteins of bladder cancer cells
   128514131 (rab5ab)
GTP-binding proteins [BR:cgar04031]
Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    128514131 (rab5ab)

SSDB

Motif

Pfam:

Ras Roc Arf Gtr1_RagA GTP_EFTU MMR_HSR1 RsgA_GTPase AAA_16

Other DBs

NCBI-GeneID:

128514131

NCBI-ProteinID:

XP_053343805

LinkDB

Position

26:3909596..3919825

AA seq 217 aa
MAGRGGATRPNGPNAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFL
TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKEL
QRQASPNIVIALAGNKADLANKRALDFEDAQSYADDNSLLFMETSAKTSMNVNEIFMAIA
KKLPKNEPQAAGTNAGRNRGVDLAETAQPAKGPCCSN

NT seq 654 nt +upstreamnt +downstreamnt
atggcaggaagaggcggtgctacaagacctaatgggccgaatgcagccagcaacaaaatc
tgtcagttcaaactggtgctgctgggcgagtctgcagtcggcaagtccagcctggtgctg
cgcttcgtcaaaggccagttccatgagtttcaggagagcacgataggagctgcattcctg
actcagacggtatgtttggacgacacgacagtgaagttcgagatctgggacacagccggt
caggagcgctaccacagtttggctccgatgtattacagaggggcgcaggcagccatcgtg
gtgtacgacatcacaaatgaagaatcatttgcacgtgcaaagaattgggttaaagagctt
cagcggcaagccagtcctaatattgtaatagctctggctggaaacaaagcagatcttgcc
aacaagagagcactggactttgaggatgcacagtcttacgcagatgacaacagtttgctt
ttcatggaaacgtcagcaaagacgtcaatgaacgtgaacgagatttttatggccatcgcg
aagaaactccccaagaacgagccacaggcggccggaacgaacgcaggacgaaatcgaggc
gtggacctggcagagacagcgcagcctgccaaagggccatgctgcagcaactaa

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