Clarias gariepinus (North African catfish): 128514150
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Entry
128514150 CDS
T10780
Symbol
cldn11b
Name
(RefSeq) claudin-11b
KO
K06087
claudin
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03272
Virion - Hepatitis viruses
cgar04382
Cornified envelope formation
cgar04514
Cell adhesion molecule (CAM) interaction
cgar04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
128514150 (cldn11b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128514150 (cldn11b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128514150 (cldn11b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128514150 (cldn11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgar03037
]
128514150 (cldn11b)
04147 Exosome [BR:
cgar04147
]
128514150 (cldn11b)
Cilium and associated proteins [BR:
cgar03037
]
Other cilia and associated proteins
Stereociliary proteins
128514150 (cldn11b)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
128514150 (cldn11b)
Exosomal proteins of colorectal cancer cells
128514150 (cldn11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF6223
TgpA_N
Motif
Other DBs
NCBI-GeneID:
128514150
NCBI-ProteinID:
XP_053343843
LinkDB
All DBs
Position
26:complement(25294614..25298636)
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AA seq
217 aa
AA seq
DB search
MSQSCRLLSGFFVSSSGWICLIIATCTNDWVKTCSLGMHACIRMDELESKGLWVECVIST
TLYHCSPLSQILTLPAYIQTCRALMVAAFLLGLPSALMALLATPCVRLGDESDGTKRKRA
VFAGILALIMSVCGLVSTVWFPIGAYHQDGLLTFGLSLYAGWLGSAFCLLGGSILTCCSG
GGDDLAQRPEKSFYYSKDLGIAGSVQATNSHAKSALV
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagagctgtcggttgctcagtgggttcttcgtgagctcctcaggttggatctgt
ctgatcatcgccacctgcactaacgactgggtgaagacctgcagcttggggatgcacgcc
tgcatcagaatggacgagctcgagtccaagggcctgtgggtcgagtgtgtgatctctaca
acgctgtaccactgttcacctctcagccagatcctcacactgcctgcctacatccagacg
tgtcgggcgctcatggtggctgcgtttctgctcggcctcccgtcggcactgatggctctc
ctggccacgccctgcgtcagactgggtgatgagagcgatggaaccaaacggaaacgcgct
gtgttcgcgggaatcctcgcgctgatcatgtccgtctgtggtctggtgtcgacggtgtgg
ttcccgattggagcgtaccatcaggacggcctgctgacgttcgggctctctctgtacgcg
ggatggttgggttctgctttctgtttgctcgggggttcgatcttgacctgctgctccgga
ggtggtgatgatctggctcaacgtcctgaaaagagcttttactactccaaagatctcggc
atcgccggctcggttcaggccacaaacagtcacgccaagagcgcgctcgtctga
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