KEGG   Clarias gariepinus (North African catfish): 128514155
Entry
128514155         CDS       T10780                                 
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    128514155 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cgar03400]
    128514155 (aptx)
Enzymes [BR:cgar01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     128514155 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     128514155 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     128514155 (aptx)
DNA repair and recombination proteins [BR:cgar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     128514155 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     128514155 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA zf-C2H2_4 zf-C2H2
Other DBs
NCBI-GeneID: 128514155
NCBI-ProteinID: XP_053343852
LinkDB
Position
26:complement(14082..18450)
AA seq 336 aa
MPTCWLVPDDERHKPIQLLHYHTHTLGRGPETKIKDQKCSRQQVELRADCNRGVVSVKQL
GSNPTSLDHVEVGRGNQVTFKPGQKLYMVNGLHPYTLQFREETSSSSSSSSSPSEVKHNP
LKRARQERDADEERHQDVEKSCRVSASSCSHTPEKEPAGHWSQGLKGSMQDPDMQVYKDE
KVVVIKDKYPKARFHWLVLPWSSISNLKALRSEHVELLRHMERVGERTARRCPGSGTLRF
RLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTEYFIESQDVIGMLERDGRVCVR
DGAAELLKLPLRCHVCHAQFPTMPKLKEHIRVHLPS
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgccgacgtgctggctcgttcctgacgatgagagacataaacccatccagctcctccat
tatcacacacacactctgggtcgaggtccagaaaccaagattaaagaccagaagtgctcc
agacagcaagtcgagctgagagcagattgtaaccgaggagtcgtcagtgtgaagcagttg
ggcagcaaccctaccagcctggaccatgtggaggtgggcaggggcaatcaggtgaccttt
aaacccggacagaagctctacatggtcaatgggcttcacccatacacactacagttcagg
gaggagacttcttcatcttcatcatcatcatcatcaccatcagaagtgaaacacaacccg
ctgaagagagcgcggcaggagagagacgccgatgaggagagacaccaggacgtggagaag
agctgcagggtctcagcgtcgtcctgttcacacacacctgagaaggaacctgcaggtcac
tggagtcaagggctcaaaggctccatgcaggacccggacatgcaggtgtacaaagacgag
aaggtggtggtgatcaaggacaagtaccccaaggcccggttccactggctggtcctgccc
tggagctccatctccaacctgaaggccctgaggtccgagcacgtggagctgctgagacac
atggagcgcgtcggggagcgcacggcgcggcggtgtcccgggtccggaacgctacgcttc
cgcctgggctaccacgccatccccagcatgagtcacgtccaccttcacgtcatcagtcag
gactttgattctccgtgtctgaagaacaagaaacactggaactccttcaccacagagtac
ttcatcgaatctcaggacgtcatcgggatgttggagagagacggccgagtgtgtgtgagg
gacggcgccgccgagctgctgaagctgccactgcgatgccatgtctgccacgcccagttt
cccaccatgcccaagctgaaggaacacatccgagttcacctgccgtcctga

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