Clarias gariepinus (North African catfish): 128514174
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Entry
128514174 CDS
T10780
Symbol
rttn
Name
(RefSeq) rotatin
KO
K16484
rotatin
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgar03037
]
128514174 (rttn)
Cilium and associated proteins [BR:
cgar03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128514174 (rttn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RTTN_N
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
128514174
NCBI-ProteinID:
XP_053343881
LinkDB
All DBs
Position
26
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AA seq
2196 aa
AA seq
DB search
MELASLIKKLAHSLVEIRVRSLRNIVSKLQLSLIYPADLVQERQLFINLLHWFNFPEVPL
QEDVLQLINTLAMHPTGAHMLRDVGAVDFLTQLSSNIDPQLRGITETILDQLFHLHTHPA
DTSSDQQPSSSFQPMEEMSLRGYFQQNASRPTDAAPTPSVSVNTSVRCLTFSVFPWLSLT
ATDRHILSSNESSLRSGNPDLVRTTCELLRDVIMQDFPAEIFLQRPSIVQNLMQLLSVSP
ENDSTSLALHALACLQQLCGSLKSRLRFHRDPSFCSAKHDPLSQNSSTSYPQEVRGTQRS
GVSTPEDLSPRPSVLGRPVMRVRGDGQDGDAASTSSSSSSSQREFPLGPNLEPEGEDPPE
LRLQQWNMARFCMETLQHTLPLLGTEKMKVFQKTLELLSDILALLRVIVSPNELWDECSI
TANELREKLRVCIEKLGDIMCHHRHVASSEQPDSTLIHHRMSYMGTSVFTIRLLQTLLPV
EKASENVPEGTTFAIFHLCLDFPFSLAFPSIHESAVAYLEQSNTENHALYRRVSQAANMM
EATCSFLKDVRAEGEKNWLELLELAGQAVDGFPYHQHLPLIKEFINICSFLWKSAQASPL
LQMESQKILLKLLSHPLLPVKAETYARILEVVKECLGVHNVSRQASSICTGVHFIFHPRV
LYEISAFGLNDQTKEVNSAAKDLLLYLLKGRLMMTASSWSKFNEALYPVIPVLQSHAGTE
DALGTSILLISGLSDEIGGTAHTSGTRLSAIIRLLFSKQHVVRNKAAQYLSSHLANSEDN
KASQPEVDNSILSSLPSLFVTDKCVDIRLGDSKKSYLKVECVNKLYSIFTSETVDMVLRK
SAAEQLVVVLQDAAMHTVLKTQGLTDKLVSLITESVNISGGSVACLSEPGVTMLRKLVYE
DPSLRHTLAQQPAFLLTLVRASLLMKANQRDVTEAAALMCFLLFDEIATVDVCTGKDDTG
TAFTPFSLPLCIIRRYNLPFRAASHHAVSPSCTVLPPYTDLMGRRAAKEALSISWNRAWH
CGTDTLLSHRRDNTTHTPEFHADLVMSESLVMSVRVCDLKAGLQECVHAIRTAGSHAGVT
NAVTRIHLYLLTDQLALKHDAHAAKSTLQKLSWHGALERFLQVKPACPEDETLLGDVLSF
LNTFFKRSQADSDDQDLKWLLELLLKQDKHVLLDLLLEVKTHGDPQKDTAIQRCGHQLQR
ELISLFNTLLLRLTHTSDRMCTLLAGPFASEFAVRLLQCLRVSDAPRFYGLPSLERSVRS
MTYTTALPGWSTHTSSMEPHALCRKYLSGLLEVISSFYVEWGGNAMSFMGKGVTKNAVIS
LLHLSHEIMSESKQEDWMSLWSLGPEQSADDPSSAQFGLAWLIPLWVDRDPEVRCASLAL
GAALSSLESGCVMLSNSCQNISGGLWATLLNILLERQECSMVRREAAFLLQNLLVMPMPA
NTEEARDCFWQSPCVHDEGSGVSLVGLPALQALLYHCHFFDHVTQMVRSCYSSRYTPTPP
WSVGAAADKSGRHWRDGSAVLNHTHGSDSISTSSTLLLSDTRSPVVCSFSGAAQEPSFNR
LGTQGQSDSDSSESLLPQECVGGSECISVVTPHLLSAVCGLLTNLLCVLPEFTHTALREN
HVLQGLLSVLDAVELERCLTELNTPDLPSSDVEDARSQVLSSVYYVRSVCKLVQADVVLS
EDCLSQSELIRPLLNNLISILMLSHTHLDMHTQNALLHTWTDVFTLLASLLRRNYPACGP
LVCGTLGKRWQHFSETIRACVDQSGSDSSLYTVAAQFLCVLFSEEAKKRGTSEEKSAPLT
AALNSESGEKLCELLLERYDKTQFQDPLKKVTAKVLMPLLACSSSAQSYACKAGLIDSCV
EQMKQIHSQLHLESVRPGKTAHRKKEENTIKELRMVLEILRNCLYQHKDCKEVATDLKLS
SVVLSLWPWLLLTDFSMNAALELLCVYTANCTAACSAVCGSSAHAALPRNPVTNSLMHAV
MKLASQVPPDNNTIHALSFSLLANLSISRDCRCLLQKSNFLQHFLSLPLPRGSSKSSKNS
TAAAILAQWLQLLLNISFEEDGQQMIMKMRGALELLTDLAQGKHGEKKHTALLILHNICF
CPANKPRVLACDKAVDLLVSCLESSSLNTRALGASALWALLHNNQKAKVTLKCPSVRLKV
DEAYTHAKTGAEQKTEENTNTHLLKCLEHLSHLLNT
NT seq
6591 nt
NT seq
+upstream
nt +downstream
nt
atggagctagcatcacttattaaaaagctcgctcactcgttagtggagatccgagttcgt
tccctgaggaacattgtctccaagcttcagctcagtctcatctacccggctgatctcgtt
caggagagacagctcttcatcaacctgctgcactggtttaacttccccgaagtcccgctg
caggaagacgtgctgcagctcattaacacactcgctatgcatccaaccggtgcacatatg
ttaagagacgtaggagcagtggacttcctaacccagctctcgtccaacattgacccccag
cttcgaggcatcacagagacgattcttgaccagctcttccaccttcacactcacccagcg
gacacttcctccgaccagcaaccgagctcttcttttcagcccatggaggagatgtcactt
agaggatatttccagcaaaatgcgtcgaggccaacagatgccgcaccaacgcccagcgtg
tcagtgaacacttctgtaagatgcttaacgttttcagtcttcccttggttgtctttgact
gcaactgacagacatattttatcgtcaaatgaaagttctttaagaagcggaaatccagac
ttggtacggaccacctgcgagcttctgcgagacgtcattatgcaggattttccagcagaa
atattcctgcagcggccaagtatagtgcagaatctgatgcagcttctcagtgtgagccca
gagaatgattccacctcgctggctctccacgctctggcctgccttcagcagctctgtgga
agcttgaaaagtcggctgcgttttcacagagatcccagcttctgctcagccaagcacgat
ccactctctcagaactcttcaacatcgtatcctcaggaggtaagagggacccaaaggtca
ggggtttcgactccagaagacttatccccccgcccttctgttctaggacgacctgtgatg
agagtccgaggggacggacaggacggcgatgctgcctctaccagcagtagcagcagcagc
tctcagagagaatttcccctcgggcccaacctggagccggagggtgaggatccgccggag
ctccggctgcagcagtggaacatggccagattttgtatggagaccctacagcacacactt
cctctcctcgggacagagaagatgaaggttttccagaagacgctggaactgctgtcggat
atcctcgcgttgctgagggtcatcgtgtccccgaatgagctctgggacgagtgcagcatc
accgccaacgaactgagagagaagctgcgggtgtgtatagaaaagcttggagacatcatg
tgccatcaccgtcacgtggcatcgtcagagcaacctgactcaactctgattcaccatcgc
atgtcctacatggggacttctgtcttcaccattcgccttctgcaaacactcctacctgtg
gagaaggcgagtgaaaacgtccctgagggtacgacgttcgccattttccatctctgtctg
gatttccccttcagtcttgcgtttcccagcatccacgagtcagccgtggcctacctggag
cagtcaaacaccgaaaaccatgccctgtaccgcagagttagtcaagctgctaacatgatg
gaggctacttgttccttcctaaaagatgttcgggctgagggagaaaagaattggctggag
ctgctggaactcgctggccaagctgtagatggctttccctaccatcagcacctacctctc
attaaggaattcatcaacatctgctccttcttgtggaaatctgctcaggcaagcccactg
cttcaaatggaaagccagaagattcttctaaagctattatcacatcctttgctgccagtg
aaggctgagacgtacgcacgcattttggaggtggtcaaggagtgtttgggggttcataat
gtgtccagacaagcttcttcgatctgcaccggcgtgcatttcatattccacccccgtgtc
ctttatgaaatcagtgccttcggccttaacgaccagacaaaagaggtgaattcagctgcc
aaggatcttcttctgtacctgctaaagggacgattgatgatgactgcttcgagttggagt
aaatttaatgaagccctttacccggttattcccgtactgcagagtcatgcaggcacagag
gatgccctgggaaccagcatcctgctgataagtgggctctcggatgagattggaggcaca
gcccatacctcaggaactcgactctctgccataatcagactgctcttctccaaacagcat
gtggtaagaaacaaagcagctcaatacctgtcatctcatttggccaattcagaagacaac
aaggcgtcccagcctgaagtggacaactcaattctgtcatcactgccatctctttttgtc
actgacaaatgtgtggacatcagactaggcgactccaagaagtcttatcttaaggtggag
tgtgtgaataagctatacagtatctttacctcagaaacggtggatatggtcctgcgcaaa
tctgcagccgagcagctggtggttgttttgcaggatgctgcaatgcacacagtactgaag
acacagggactgacggacaaactcgtgtctttgattacagagagtgtgaacatcagtgga
gggtctgtcgcgtgcctgtccgagccgggtgttacgatgctgaggaagttagtatacgaa
gatccgtcactgcgtcacacactagctcagcaaccggcttttctcctcacactggtccga
gcctcgctgcttatgaaggccaatcagagagatgtgaccgaagccgcagcactgatgtgt
ttcctgctttttgatgagattgcaacagtagatgtgtgcactgggaaagatgacacgggt
acagcttttactccattctcattgcccctctgcattatcagaaggtataatctgcctttt
cgcgctgcgtctcaccacgccgtaagtcccagctgcaccgtactgcctccttatactgat
ctgatgggtcggagagctgccaaagaggcgctgagcattagctggaacagagcctggcac
tgcggcaccgacactctgctctcacacaggagagacaacaccactcacacacctgagttt
catgcagatctggtgatgtcagagtctctggtcatgtcagtgcgagtgtgtgatctgaaa
gcggggcttcaagagtgtgttcatgccattcgcacagccggatcgcacgccggcgtcacc
aacgctgtgaccagaatacacctttatctcctgaccgatcagctagctcttaaacatgac
gcacacgctgccaagagcacactgcagaaactcagctggcatggcgctctagagagattt
ctccaggtaaagcctgcttgtcccgaggacgagacgctgctaggtgatgtcttgtcgttc
ctgaacactttcttcaagcgatctcaggctgattctgatgatcaagatctgaaatggctt
ctagaattactcctgaaacaggacaaacatgtcctgctggacctgctgctagaagtgaag
acgcacggggaccctcagaaagacaccgcgattcaacgctgcggacatcaactgcagaga
gagctgatctcgctgttcaacacactactgctgaggctcacacacacctccgacaggatg
tgtacgctgctcgccgggccatttgcttccgagtttgctgtccgtctgctgcagtgtctt
cgtgtttcagatgccccacgtttttacggcctcccctctctggagcgttctgtacgcagc
atgacatacaccaccgctctgcccggctggagcactcacacgagcagcatggagccacac
gcactctgccggaaatatctcagcggcctacttgaggtaatttcctctttttacgtggag
tggggaggaaatgccatgtcctttatgggaaaaggagtgaccaaaaatgcagtgatctct
ctgcttcatctttcccatgagataatgtctgagagcaagcaggaggactggatgtctctg
tggtctctggggcctgaacagagtgctgatgatccgagttctgctcagtttggcctcgct
tggttaatcccactgtgggtggatcgcgaccccgaggtacgctgtgccagcctggcgctg
ggcgcggctctctcttcgttagaaagcggctgtgtgatgttgtcgaatagctgccagaac
atctcaggcggtttgtgggcgacgctgctcaacatcttgctggagagacaggagtgcagc
atggtgcgcagagaggcagcgtttcttctacaaaacctgctggtgatgccgatgcctgcc
aacaccgaggaggcccgagactgcttctggcagagcccatgtgttcatgatgaaggatct
ggcgtgtcactcgtgggtctcccggccctgcaggctctcctctatcactgccatttcttt
gatcatgtgactcagatggtgaggagctgctactcgtctcgatacactcccacgcccccc
tggtcggtcggcgccgccgctgataagtccggtaggcactggagagacggctcagctgtg
ttgaatcacacacacggctcagactccatttccacctccagcaccttgctcctgagtgac
actcgttctcccgtcgtctgctccttctccggagcggcacaggagccttcgttcaacaga
cttggcacacaaggtcagagtgactcagacagctccgaatcacttcttcctcaggagtgt
gtaggaggatcagagtgcatctctgtagtaacccctcacctactgtcagctgtgtgtgga
ttactaaccaacctgctgtgtgtgctgcctgagtttacacacacagcgctcagagagaac
cacgtcctgcagggcctgctgagtgtgctggatgcagtggagctggagcgatgtctgact
gagcttaacacacctgatttaccttcttctgatgtggaggacgccaggagccaggtgttg
agtagtgtgtattatgtacggagtgtgtgcaagctggtacaggctgatgttgtgctcagt
gaggattgtctctcccagtcagagctcattagacctctgctgaataacctcatctccatc
ctcatgctctcacacacacacctcgatatgcatacccagaatgcattactgcacacctgg
acagatgtgtttacgctgctggcgagtctcctgcgcaggaactaccccgcatgtggccca
cttgtgtgcgggactctggggaaacgctggcagcacttctcagaaaccatccgtgcatgt
gtggaccaatctggttcggattcatcgctgtatactgtggctgcacaattcctgtgtgtt
ttgttttctgaagaggcgaagaagagagggacgagtgaagagaaatcggctcctctgact
gctgctctgaattccgaatcaggagagaaactgtgcgaattgctgctggagagatatgac
aaaacccagttccaggatcctcttaagaaggtcacagcgaaagtcctgatgcccctccta
gcctgcagctccagcgctcagagttatgcgtgcaaagcgggtcttatcgacagctgtgtg
gaacagatgaaacagatccactctcagcttcacctggagtctgtaagaccaggcaaaacc
gcacacaggaaaaaggaggagaacacaataaaggagcttaggatggtgttggagatcctg
cggaattgtctctatcaacataaagattgtaaagaagtagcaacagatttaaaactttcc
tctgtggtgttgtctctttggccgtggctcctccttaccgacttcagcatgaatgcagca
ttagaactgctctgtgtgtacacagccaactgcaccgcagcatgcagcgctgtatgtggt
agttcagctcacgctgctttacctagaaatcctgtcacgaactctctgatgcacgcggtg
atgaagctggcgtcgcaggttcctcctgataacaacaccatccacgcactttctttttct
ctgctcgctaatctgtccatctccagagactgccgatgcctcctacagaagagcaacttc
ctgcagcactttctgtctctcccgttgcctcgggggagcagtaaaagtagtaaaaacagc
acagcagcagccattctggctcagtggctccagctgctcctgaacatctctttcgaagaa
gacggtcagcagatgatcatgaagatgcgaggagctctggagttgttgacggatctggct
cagggcaaacacggagagaaaaaacacacagctctgctcatccttcataacatctgcttc
tgcccagcgaacaaacctcgagttcttgcttgtgataaagctgtagacctgctcgtgtca
tgtttggagagcagctcattaaacacccgtgctctcggagcttcagcactgtgggcttta
ctgcacaacaatcagaaggcaaaggtgactctgaagtgcccctctgtcagactgaaagtg
gatgaagcatacacgcacgctaagacaggtgcagaacagaaaacagaagaaaacacaaac
acacatttactgaaatgtcttgaacatctaagccaccttttaaacacataa
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